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Record W2464209408 · doi:10.1385/1-59259-050-0:47

Expression of m-Calpain in Escherichia coli

2003· article· en· W2464209408 on OpenAlexaff
John S. Elce

Bibliographic record

VenueHumana Press eBooks · 2003
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCalpain Protease Function and Regulation
Canadian institutionsQueen's University
FundersMedical Research Council
KeywordsCalpainCloning (programming)Microscale chemistryEscherichia coliFunction (biology)Yield (engineering)Protein expressionIsolation (microbiology)EnzymeCrystallizationChemistryCell biologyBiologyBiochemistryComputational biologyMolecular biologyMaterials scienceBioinformaticsGeneComputer scienceMathematics

Abstract

fetched live from OpenAlex

The purification of μ-and m-calpain on a medium to large scale from animal tissues such as bovine heart or skeletal muscle, and on a microscale from less than 0.5 g of tissue, is described in Chapters 1 and 2. These preparations are excellent for many purposes, but for some other purposes, for example for crystallization of calpain, and for structure-function studies which require mutations, it is clear that artificial expression of the cloned enzymes is required. The cloning also provides the opportunity to introduce a His-tag, which fortunately in m-calpain does not affect activity; the His-tag is not obligatory, but it is found to increase the expression yield markedly, and its presence enormously simplifies the purification, making it possible to achieve a higher final degree of purity with a reasonable yield. These keywords were added by machine and not by the authors. This process is experimental and the keywords may be updated as the learning algorithm improves.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0010.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.249
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations12
Published2003
Admission routes1
Has abstractyes

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