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Smart, Innovative and Intelligent Technologies Used in Drug Designing

2014· book-chapter· en· W2494245973 on OpenAlexaff
Shirish Deshpande, Swarna Basu, X. Li, X. Chen

Bibliographic record

VenueAdvances in logistics, operations, and management science book series · 2014
Typebook-chapter
Languageen
FieldComputer Science
TopicComputational Drug Discovery Methods
Canadian institutionsUniversity of Lethbridge
Fundersnot available
KeywordsComputer scienceCloud computingSystems engineeringData scienceDrug discoveryEngineeringBioinformatics

Abstract

fetched live from OpenAlex

Smart and intelligent computational methods are essential nowadays for designing, manufacturing and optimizing new drugs. New and innovative computational tools and algorithms are consistently developed and applied for the development of novel therapeutic compounds in many research projects. Rapid developments in the architecture of computers have also provided complex calculations to be performed in a smart, intelligent and timely manner for desired quality outputs. Research groups worldwide are developing drug discovery platforms and innovative tools following smart manufacturing ideas using highly advanced biophysical, statistical and mathematical methods for accelerated discovery and analysis of smaller molecules. This chapter discusses novel innovative applications in drug discovery involving use of structure-based drug design which utilizes geometrical knowledge of the three-dimensional protein structures. It discusses statistical and physics based methods such as quantum mechanics and classical molecular dynamics which can also play a major role in improving the performance and in prediction of computational drug discovery. Lastly, the authors provide insights on recent developments in cloud computing with significant increase in smart and intelligent computational power thus allowing larger data sets to be analyzed simultaneously on multi processor cloud systems. Future directions for the research are outlined.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.022
Threshold uncertainty score0.075

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.003
Science and technology studies0.0010.002
Scholarly communication0.0030.004
Open science0.0010.001
Research integrity0.0010.004
Insufficient payload (model declined to judge)0.0220.019

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.295
Teacher spread0.272 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2014
Admission routes1
Has abstractyes

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