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Record W2505982314 · doi:10.1002/9783527683734.ch9

Photochromic Materials in Biochemistry

2016· book-chapter· en· W2505982314 on OpenAlexaff
Danielle Wilson, Neil R. Branda

Bibliographic record

Venuenot available
Typebook-chapter
Languageen
FieldMaterials Science
TopicPhotochromic and Fluorescence Chemistry
Canadian institutionsSimon Fraser University
Fundersnot available
KeywordsPhotochromismBiomoleculePhotoisomerizationNanotechnologyChromophoreChemistryMaterials sciencePhotochemistryOrganic chemistryIsomerization

Abstract

fetched live from OpenAlex

This chapter discusses the photocontrol of biologically relevant systems using synthetically derived photochromic molecules. Then, it presents a general overview of recent progress made in the field of light-controlled biomolecules in a variety of contexts. Today, there is a wide range of tools capable of modifying various biochemical functions. Those relevant to artificial photochromic biosystems are discussed in the chapter. The design of artificial light-controlled biological systems using photochromic molecules relies on harnessing the light-induced structural changes that accompany the chromophore's photoisomerization process and exploiting these changes to influence biomolecule function. There are a number of factors to consider when designing a light-controlled biomolecule that has an incorporated photochromic tether. The chapter focuses on photocontrol of proteins and peptides, the drawbacks that accompany the use of ultraviolet light to control channel function in living systems have prompted researchers to design photoswitches that can be isomerized using longer wavelengths of light.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.050
Threshold uncertainty score0.168

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0020.003
Open science0.0010.001
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0500.035

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.220
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2016
Admission routes1
Has abstractyes

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