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Record W2513139465 · doi:10.1118/1.4961778

Poster - 04: Resolving the Glutamine Resonance with an Optimized Magnetic Resonance Spectroscopy PRESS Sequence at 9.4T

2016· article· en· W2513139465 on OpenAlexaff
Brennen J. Dobberthien, Anthony G. Tessier, B. G. Fallone, Atiyah Yahya

Bibliographic record

VenueMedical Physics · 2016
Typearticle
Languageen
FieldMedicine
TopicAdvanced MRI Techniques and Applications
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsGlutamineIn vivoSpectroscopyNuclear magnetic resonance spectroscopyResonance (particle physics)Nuclear magnetic resonanceChemistryYield (engineering)GlutathioneSequence (biology)StereochemistryPhysicsBiochemistryBiologyAmino acidAtomic physics

Abstract

fetched live from OpenAlex

Purpose: To optimize the timings of the magnetic resonance spectroscopy technique, Point RESolved Spectroscopy (PRESS), to resolve glutamine (Gln; ∼2.45ppm) in vivo at 9.4T. The Gln resonance is contaminated by N-acetylaspartate (NAA; ∼2.49ppm) and to a lesser extent by glutathione (GSH; ∼2.51ppm). Methods: Signals of glutamate (Glu; ∼2.35ppm), Gln, and NAA at 9.4T in response to TE (echo time) values of a PRESS sequence were investigated numerically, and the {TE1, TE2} combination that best resolved Gln while retaining Glu was considered optimal. The timings were verified on phantom solutions and in vivo on four Sprague Dawley rat brains. In-vivo spectra were analyzed with LCmodel. Results: An optimal {TE1, TE2} combination was determined to be {106ms, 16ms}, which resulted in simulated peak areas for Glu, Gln, and NAA, of 54%, 42%, and −2%, respectively, of the corresponding shortest {2ms, 2ms} values. Experimentally, the Gln yield with the optimal TE values was found to be ∼54% of that obtained with a short-TE of {TE1, TE2} = {12ms, 9ms}. The yield changed by <10% with the addition of NAA and GSH. The rat brain spectra showed well resolved peaks for Glu and Gln at ∼2.35ppm and ∼2.45ppm, respectively. LCModel Cramér-Rao Lower Bound values for all rats were <8% and <20% for Glu and Gln, respectively. Conclusions: A PRESS sequence with {TE1, TE2} = {106ms, 16ms} is suitable for resolving Gln in vivo at 9.4T.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.008
Threshold uncertainty score0.027

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0080.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.023
GPT teacher head0.308
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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