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Record W2524573478 · doi:10.1182/blood.v120.21.322.322

Mir-137 and Mir-197 within Chromosome 1p Minimal Deletion Region Regulate Apoptotic Activity in Multiple Myeloma by Targeting MCL 1

2012· article· en· W2524573478 on OpenAlexaff
Yijun Yang, Venus Onay, Connie Qi, Manujendra N. Saha, Yi Ning, Hong Chang

Bibliographic record

VenueBlood · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicMicroRNA in disease regulation
Canadian institutionsUniversity Health Network
Fundersnot available
KeywordsBiologyMolecular biologymicroRNATransfectionApoptosisGeneCell cultureCell growthPopulationAnnexinMiRBaseCancer researchCell biologyGeneticsFlow cytometryMedicine

Abstract

fetched live from OpenAlex

Abstract Abstract 322 Chromosome 1p deletion is detected in nearly 20 % of patients diagnosed with multiple myeloma (MM) and confers a poor prognosis. To pursue our discovery for potential tumor suppressor gene(s) in the 1p21 deletion region, we searched for all miRNA genes that are mapped to the minimal deletion region (1p12-1p21). Defining these nucleotides as start and end locations in miRBase search lists identifies five miRNAs located this deletion region. In the present study, we focused on the functional role of miR-137and miR-197 in MM since they have been shown to be deregulated in the solid tumors. Low expressions of miR-137 and miR-197 were validated in MM1S, MM1R, and My5 cell lines harboring del (1p12-1p21) compared with H929 and U266 cell lines without such deletion by qRT-PCR analysis. In order to evaluate the involvement of miRNA-137 and -197 in MM cells, we transfected pre-miR-137 and pre-miR-197 in above cell lines. A decrease in cell proliferation of MM cells was observed in a dose dependent manner in MM1S, MM1R, and MY5 cells but not in H929 cells. Overexpression of miR137 or miRNA-197 induces cell apoptosis by increased amount of Annexin V–positive cells and increased percentage of sub-G1 population in MM1S cells. In an attempt to identify the differentially expressed apoptosis genes between miRNAs-treated and untreated MM cells, we conducted a customized human apoptosis RT2 Profiler PCR Array assay to monitor the expression of 84 key genes, which were further validated by qRT-PCR analysis. We observed regulation of apoptosis-linked genes in a proapoptotic manner, indicating that these two miRNAs could sensitize cells for apoptotic events. In cells treated with miR-137 or -197, the expression of the anti-apoptotic gene-MCL1 showed no noticeable changes, whereas the other genes coding for proapoptosis-inducing and -supporting products such as BAD, BAX, BID, and BIM were markedly increased. In addition, transfection with miR-137 or -197 in MM1S cells resulted in an increase of caspase-9, caspase-3, and PARP, but not caspase-8, at 48 hours post-transfection. Importantly, MCL1 protein in MM1S cells at 72 hours of treatment with miR-137 or -197 was significantly decreased compared to scrambled treatment by western blotting assay. These results suggest these 2 miRNAs induced apoptosis in MM cells may be mediated by extrinsic apoptotic pathways through targeting MCL1 gene. To further identify miR-137 and -197 targets, we firstly used bioinformatics analysis. Comparing the results obtained from the different searches, we found that the MCL1 protein was predicted as a target of miR-137 and -197 by the miRanda algorithm (www.microrna.org/microrna/home.do and http://www.targetscan.org/vert_52/). RNAhybrid also predicted a possible binding region of miR-137 and -197 in the 3' untranslated region (UTR) of MCL1. To validate MCL1 as miR-137 and -197 target, we cloned the 3' UTR sequence of human MCL1 into the luciferase-expressing vector pEZX-MT01 to control downstream of the luciferase stop codon. MM1S cells were transiently transfected with this construct in the presence of pre-miR-137 or pre-miR197, or a scrambled oligonucleotide acting as a negative control. As reported in luciferase plate reader, miR-137 or miR-197 significantly reduced luciferase activity compared with the scrambled control miRNA. This indicates that miR-137 and -197 bind to the 3'UTR of MCL1 and impair its mRNA translation. In order to further confirm that the region was specific for binding with miR-137 and -197, we generated the deletion mutants of 3'UTR of MCL1 lacking the binding site for miR137 and miR-197, respectively. The mutants were subsequently cloned into the luciferase gene following Renilla gene, and then cotransfected with pre-miR-137 or -197 in MM1S cells. miR-137 and -197 added singularly or at the same time, did not significantly reduce luciferase activity in the presence of the 3'UTR of MCL1 mutated sequence. In conclusion, our data suggest that miR-137 and -197 induce apoptosis in myeloma cells at least in part through the control of MCL1 protein expression. Deregulated miR-137 or -197 may play an important role in the subset of high-risk MM with 1p deletions. Disclosures: No relevant conflicts of interest to declare.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.221
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2012
Admission routes1
Has abstractyes

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