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Record W2529764475 · doi:10.1139/cjfas-2016-0129

Transferability and scalability of species distribution models: a test with sedentary marine invertebrates

2016· article· en· W2529764475 on OpenAlexafffundvenue
Aaron M. Eger, Janelle M. R. Curtis, Marie‐Josée Fortin, Isabelle M. Côté, Frédéric Guichard

Bibliographic record

VenueCanadian Journal of Fisheries and Aquatic Sciences · 2016
Typearticle
Languageen
FieldEnvironmental Science
TopicSpecies Distribution and Climate Change
Canadian institutionsSimon Fraser UniversityUniversity of TorontoFisheries and Oceans CanadaMcGill University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsTransferabilityScale (ratio)InvertebrateEnvironmental scienceSpecies distributionEcologyComputer scienceBiologyMachine learningCartographyGeography

Abstract

fetched live from OpenAlex

We found the predictive accuracy of species distribution models (SDMs) for sedentary marine invertebrates to be dependent on the methodology of their application. We explored three applications of SDMs: first a model tested at a scale smaller than at which it was trained (downscaled), second a model tested at scale larger than its training scale (upscaled), and third a model tested at the same scale but outside the extent for which it was trained (transferred). The accuracies of these models were compared with the “reference” models that were trained and tested at the same scale and extent. We found that downscaled SDMs had higher predictive accuracy than reference SDMs. Transferred and upscaled models had lower predictive accuracy than their reference counterparts but still performed better than random, making them potentially acceptable alternatives where information is lacking for imminent decisions or in cost-restricted scenarios. Our results provide insights into the techniques available for researchers and managers developing SDMs at varying scales, with different species, and with different levels of initial information.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.014
metaresearch head score (Gemma)0.058
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.026
Threshold uncertainty score0.074

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0140.058
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.004
Open science0.0020.002
Research integrity0.0010.003
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.192
Teacher spread0.169 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations10
Published2016
Admission routes3
Has abstractyes

Explore more

Same venueCanadian Journal of Fisheries and Aquatic Sciences→Same topicSpecies Distribution and Climate Change→French-language works237,207→