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Bioinformatics

2016· book-chapter· en· W2536447134 on OpenAlexaff
Jorge Niosi

Bibliographic record

VenueAdvances in bioinformatics and biomedical engineering book series · 2016
Typebook-chapter
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Bioinformatics, and Biomedical Research
Canadian institutionsUniversité du Québec à Montréal
Fundersnot available
KeywordsConvergence (economics)Political scienceData scienceBiologyBiotechnologyComputer scienceEconomic growthEconomics

Abstract

fetched live from OpenAlex

Bioinformatics is the methodological tool required to use the massive genomics databases being created on human, animal, bacterial and vegetal organisms. This paper retraces the development of bioinformatics as a new discipline and its diffusion into Latin America. It argues that governments in the region do not pay enough attention at this fast-growing new area of the set of biotech technologies stemming from the convergence between information and communication technology and biotechnologies, and in consequence, the region is falling increasingly behind the world leader (the United States), Japan and Western Europe.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.014
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Review · Consensus signal: none
Teacher disagreement score0.203
Threshold uncertainty score0.677

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.014
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0020.002
Bibliometrics0.0030.005
Science and technology studies0.0020.001
Scholarly communication0.0070.004
Open science0.0040.004
Research integrity0.0020.003
Insufficient payload (model declined to judge)0.2030.253

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.233
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2016
Admission routes1
Has abstractyes

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