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Record W2553320254 · doi:10.2527/jam2016-0496

0496 Nurturing healthy gut microbiome: route to increased disease resistance in ruminants

2016· article· en· W2553320254 on OpenAlexaff
Le Luo Guan, Nilusha Malmuthuge

Bibliographic record

VenueJournal of Animal Science · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGut microbiota and health
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsBiologyMicrobiomeGut floraColostrumDiarrheaAntibioticsColonizationImmune systemDiseaseGut microbiomeMicrobiologyImmunologyPhysiologyMedicineInternal medicineBioinformaticsAntibody

Abstract

fetched live from OpenAlex

Perturbations in gut microbiota colonization during early life have been shown to present long lasting influences to the host immune responses, health and metabolism as well as subsequent microbial succession. These perturbations can be caused by nutritional imbalances, differing feeding methods, nutritional regimes and antibiotic treatments during the early life. Management of ruminants can vary significantly due to different feeding practices and it relies heavily on antibiotics prevention/treatments for diarrhea and pneumonia in pre-ruminants. However, our understanding on the influence of such management practices on gut microbiome as well as ruminant health and metabolism is very limited. Our recent study has revealed that feeding of heat-treated colostrum soon after birth enhances the colonization of beneficial bacterium, bifidobacteria, which is well-studied using mouse models and has been shown to have greater impact on mucosal immune system development as well as weight gain in children. Besides, the colonization of bifidobacteria in calf gut has been suggested as a preventive mechanism of pathogenic E. coli that causes neonatal calf diarrhea. The use of next generation sequencing approaches to study calf gut microbiome and linking the early microbial composition with that of calf phenotypes have reported that higher abundance of Fecalibacterium is associated with decreased diarrhea incidences and increased body weight, suggesting linkages between gut microbiome, calf health and growth. Moreover, diet-driven changes in rumen microbiome are related to the development of subacute ruminal acidosis, a prevalent metabolic disorder in adult cattle. Thus, understanding on gut microbiome and their link to gut/rumen development and metabolism will provide means to improve health in ruminants via microbial manipulation. Such manipulation methods toward nurturing a healthy gut microbiome not only improve the disease resistance in ruminants, but may also decrease the heavy antibiotic usage that is in practice in the industry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.013

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0040.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.292
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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