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Record W2553699491 · doi:10.1093/neuonc/nov204.95

ATPS-95THE PROGNOSTIC AND PREDICTIVE VALUE OF AN EXPLANT ASSAY OF GLIOMAS IN RESPONSE TO TEMOZOLOMIDE

2015· article· en· W2553699491 on OpenAlexaff
Amparo Wolf, Warren McDonald, David R. Macdonald, Joseph Megyesi, Penny Costello

Bibliographic record

VenueNeuro-Oncology · 2015
Typearticle
Languageen
FieldMedicine
TopicGlioma Diagnosis and Treatment
Canadian institutionsWestern University
Fundersnot available
KeywordsTemozolomideGliomaExplant cultureMedicinePathologicalAnaplastic astrocytomaPathologyBrain tumorIDH1DacarbazinePredictive markerGlioblastomaCancer researchOncologyChemotherapyInternal medicineBiologyAstrocytomaIn vitroCancerMutation

Abstract

fetched live from OpenAlex

INTRODUCTION: Glioblastoma Multiforme (GBM) is the most common and lethal primary adult brain tumor, with significant variability in therapeutic response due to its underlying molecular and pathological heterogeneity. This study investigated the prognostic and predictive value of an established explant assay of surgical specimens of gliomas in response to the clinically relevant chemotherapy temozolomide (TMZ). METHODS: One hundred and thirty-eight patients with pathologically-verified gliomas and ongoing follow-up of clinical outcomes were included in the study. Tumor specimens at the time of resection were plated onto a collagen matrix with and without TMZ. Using video microscopy, the migratory distance of the cells was quantified over 5 days. RESULTS: One hundred and eleven viable explant assays were collected in glioma patients including 65 GBMs, 19 anaplastic, 13 grade II and 14 recurrent high grade glioma. GBMs showed increased invasiveness compared to anaplastic and grade II gliomas on the assay. Glioma patients whose tumors showed a greater invasive distance on the assay had reduced overall survival. Inhibition of invasion by 20% by TMZ on the explant assay predicted the time to recurrence after TMZ treatment and the overall survival of GBM patients. CONCLUSION: This study demonstrates that an explant assay of surgical specimens of gliomas, by reproducing the in vivo environment, can predict overall survival of gliomas patients and response to temozolomide. Investigations are ongoing to determine whether response on the assay is of predictive value beyond genetic markers including MGMT and IDH1.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.316
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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