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Oncogenic HOXA9 Inhibits Cellular Apoptosis Induced by Ionizing Radiation (IR) in Transgenic Zebrafish

2008· article· en· W2558249533 on OpenAlexaff
Ellen R. Boyd, A. Michael Forrester, Clemens Grabher, Fui Boon Kai, Sahar Da’as, A. Thomas Look, Jason N. Berman

Bibliographic record

VenueBlood · 2008
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicZebrafish Biomedical Research Applications
Canadian institutionsIzaak Walton Killam Health CentreDalhousie University
Fundersnot available
KeywordsBiologyZebrafishCancer researchDanioTranscription factorOncogeneCarcinogenesisCell biologyMyeloid leukemiaTransgeneApoptosisGeneticsGeneCell cycle

Abstract

fetched live from OpenAlex

Abstract Acute myeloid leukemia (AML) is characterized by the failure of terminal cellular differentiation of the myeloid lineage, and retains a significant rate of mortality despite aggressive therapy. One key oncogenic candidate, HOXA9 – belonging to the highly-conserved HOX family of developmental transcription factors – is frequently overexpressed in AML. In particular, this may result from the rare, but recurrent t(7;11)(p15;p15) chromosomal translocation, yielding the chimeric transcription factor NUP98-HOXA9. This translocation event is associated with a poor prognosis and elucidating the molecular activity of this fusion oncogene will enable the development of targeted therapeutics. Despite established mammalian models of AML, specific transcriptional targets of HOXA9 remain poorly defined. The zebrafish, Danio rerio, possesses orthologous blood cells to humans, making it a reliable model of vertebrate hematopoiesis and a promising tool for studying the molecular mechanisms underlying AML. The zebrafish has many advantages over traditional mouse models: chiefly, the ex utero development and transparency of zebrafish embryos allow for ease of manipulation, phenotypic analysis, and high throughput screening. We have demonstrated that ubiquitous overexpression of the human NUP98-HOXA9 oncogene in germline transgenic zebrafish embryos protects against apoptosis induced by ionizing radiation (IR) – a hallmark of oncogenesis. Acridine orange staining was indicative of decreased apoptosis in live transgenic embryos compared with wild type (WT) controls. Using whole mount immunofluorescent labeling, we similarly demonstrated that IR-treated transgenic embryos have a significant reduction in levels of activated caspase-3, a downstream effector protein in the conserved caspase cascade. By comparison, only a mild reduction in IR-induced apoptosis and activated caspase-3 was observed in a second transgenic zebrafish line overexpressing murine native Hoxa9, suggesting a gradient of impact on cell survival. Taken together, these findings implicate a block in caspase-3-dependent apoptosis as a mechanism underlying HOXA9-mediated oncogenesis in vivo and provide an opportunity to perform chemical modifier screens to identify agents that restore a WT phenotype. Whole mount RNA in situ hybridization for expression of pro-apoptotic genes, bad and puma, and anti-apoptotic genes, bcl2 and bcl-xL, will provide further insight into the effects of oncogenic HOXA9 on the caspase cascade. Similarly, rescue of caspase-3 activation and IR-induced apoptosis is underway via microinjection of bad and puma mRNA. To achieve robust and continuous myeloid-specific expression of oncogenic HOXA9 and partners, new transgenic strategies using both the Tol2 transposon-based Gateway cloning system and Cre/lox-induction are being employed. These lines will enable evaluation of myeloid-specific apoptosis, cell cycle regulation and cellular maturation to corroborate our findings in the ubiquitously-expressing lines, providing further insight into leukemogenic mechanisms and the potential to identify novel targeted therapies to improve the outcome in human AML.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.250
Teacher spread0.234 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2008
Admission routes1
Has abstractyes

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