MétaCan
Menu
Back to cohort
Record W2559989326 · doi:10.1109/jbhi.2016.2637342

Automated Detection and Segmentation of Vascular Structures of Skin Lesions Seen in Dermoscopy, With an Application to Basal Cell Carcinoma Classification

2016· article· en· W2559989326 on OpenAlexafffund
Pegah Kharazmi, Mohammed I. AlJasser, Harvey Lui, Z. Jane Wang, Tim K. Lee

Bibliographic record

VenueIEEE Journal of Biomedical and Health Informatics · 2016
Typearticle
Languageen
FieldMedicine
TopicCutaneous Melanoma Detection and Management
Canadian institutionsUniversity of British ColumbiaBC Cancer Agency
FundersNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health Research
KeywordsBasal cell carcinomaSegmentationPathologyImage segmentationMedicineComputer scienceCarcinomaArtificial intelligenceBasal cellSkin cancerRadiologyCancerInternal medicine

Abstract

fetched live from OpenAlex

Blood vessels are important biomarkers in skin lesions both diagnostically and clinically. Detection and quantification of cutaneous blood vessels provide critical information toward lesion diagnosis and assessment. In this paper, a novel framework for detection and segmentation of cutaneous vasculature from dermoscopy images is presented and the further extracted vascular features are explored for skin cancer classification. Given a dermoscopy image, we segment vascular structures of the lesion by first decomposing the image using independent-component analysis into melanin and hemoglobin components. This eliminates the effect of pigmentation on the visibility of blood vessels. Using k-means clustering, the hemoglobin component is then clustered into normal, pigmented, and erythema regions. Shape filters are then applied to the erythema cluster at different scales. A vessel mask is generated as a result of global thresholding. The segmentation sensitivity and specificity of 90% and 86% were achieved on a set of 500 000 manually segmented pixels provided by an expert. To further demonstrate the superiority of the proposed method, based on the segmentation results, we defined and extracted vascular features toward lesion diagnosis in basal cell carcinoma (BCC). Among a dataset of 659 lesions (299 BCC and 360 non-BCC), a set of 12 vascular features are extracted from the final vessel images of the lesions and fed into a random forest classifier. When compared with a few other state-of-art methods, the proposed method achieves the best performance of 96.5% in terms of area under the curve (AUC) in differentiating BCC from benign lesions using only the extracted vascular features.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: none
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.300
Teacher spread0.282 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations100
Published2016
Admission routes2
Has abstractyes

Explore more

Same venueIEEE Journal of Biomedical and Health InformaticsSame topicCutaneous Melanoma Detection and ManagementFrench-language works237,207