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Record W2562772129 · doi:10.1016/s1525-0016(16)33908-9

299. Efficient Functional Oxidase Correction after CRISPR-Oligomer Gene Repair in X-CGD Patient Hematopoietic Stem Cells (HSC) Using Non-Viral, cGMP Compliant, Scalable, Closed System

2015· article· en· W2562772129 on OpenAlexaboutno aff
Linhong Li, Suk See De Ravin, Cornell Allen, Pachai Natarajan, Harry L. Malech, Madhusudan V. Peshwa

Bibliographic record

VenueMolecular Therapy · 2015
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicCRISPR and Genetic Engineering
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyGenome editingCRISPRGenetic enhancementStem cellHematopoietic stem cellViral vectorCas9GeneHaematopoiesisMolecular biologyGenetics

Abstract

fetched live from OpenAlex

Gene therapy using integrating viral vectors in hematopoietic stem cells (HSC) has shown clinical benefit in genetic diseases. The safety concerns associated with random integration and the lack of gene expression regulation remain key challenges with use of viral vectors. Efficient and target-site specific correction of mutation(s) in patient HSC genomic DNA using non-viral methods may improve safety and gene expression regulation. We and others have previously reported that loading of Nucleases in the form of messenger RNA (mRNA) results in low toxicity and efficient functional gene editing when using MaxCyte's rapid, automated, cGMP and regulatory compliant, and closed cell loading platform. This platform has been cleared for use in human clinical trials for multiple applications of targeted gene editing in stem cells and immune cells. We report herein that transfecting CRISPR (Cas9+gRNA) mRNA along with donor oligomer specific to a hotspot mutation in the gp91phox gene (CYBB) located on exon 7 associated with the X-linked form of Chronic Granulomatous Disease (X-CGD), using MaxCyte GT System, results in efficient repair of the 676T (stop codon) to 676C (Arginine) mutation, resulting in gp91 protein expression and associated oxidase activity. Plasmids encoding Cas9 and gRNA were purchased from the Genomic Engineering Center at Washington University (St. Louis, MO). The mRNA encoding Cas9 and gRNA were synthesized at MaxCyte using mMESSAGE mMACHINE® T7 Ultra kit, (Ambion, Austin, TX). Patient EBV-transformed B cell line (B-LCL) and patient HSC were obtained under NIAID IRB approved protocol after patient written informed consent. The cells were cultured in RPMI-1640+10% FBS+2mM L-glutamine and StemSpan medium (Stem Cell Technologies, BC, Canada) supplemented with 100ng/ml SCF, Flit3L and TPO, respectively. We first optimized transfection conditions with the X-CGD patient B-LCL. It was found that B-LCL can be efficiently transfected with CRISPR and donor oligomer. Transfected B-LCL exhibit 80±6% viability, and maintained cell proliferation rate identical to control cells. Cel-1 assay shows 30-40% (N=8) efficiency of specific-site gene editing. Using donor oligomer containing a HindIII restriction site, it was determined that the DNA integration efficiency in Exon 7 was 35±8% (N=3). Using donor oligomer with the removal of HindIII restriction site, the expression of functional gp91 protein as determine by flow cytometry was 9±3% (N=3). These developed protocols were used to transfect HSC obtained from the same CGD patient (N=1). Following in vitro myeloid differentiation of gene mutation-repaired CGD HSC, 6.3% of the differentiating cells containing neutrophils and monocytes were oxidase positive in the dihydrorhodamine (DHR) flow cytometry oxidase function assay. These observations demonstrated restoration of phagocyte oxidase activity from the gene repair. Work is in progress to optimize and achieve clinical scale-up of the process which may have broad applicability to the treatment of monogenic diseases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.117
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.253
Teacher spread0.240 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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