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Record W2563046067 · doi:10.1158/1538-7445.am2015-1412

Abstract 1412: Utilizing cell surface markers to define osteosarcoma and the stages of osteoblast differentiation

2015· article· en· W2563046067 on OpenAlexaff
Pratistha Koirala, Vincent Poon, Sajida Piperdi, Amy Park, Michael A. Fremed, Michael Roth, Jonathan Gill, Richard Görlick

Bibliographic record

VenueCancer Research · 2015
Typearticle
Languageen
FieldMedicine
TopicSarcoma Diagnosis and Treatment
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsOsteosarcomaMesenchymal stem cellCD44Cluster of differentiationFlow cytometryPathologyProgenitor cellOsteoblastCancer researchBiologyCellMedicineStem cellImmunologyCell biologyIn vitro

Abstract

fetched live from OpenAlex

Abstract Background Osteosarcoma (OS) is the most common primary malignant bone tumor in children. Despite advances in OS treatment, survival rates have remained stagnant over the past three decades. This may in part be reflective of the complex nature of OS—although all OS’ are pleomorphic, spindle shaped cells that are capable of producing osteoid, this is often where the similarities between tumors ends. Tumor phenotypes can be used to classify OS into multiple groups including the most common form, conventional, which can be further subdivided into osteoblastic, chondroblastic, or fibroblastic OS. Although these tumors display unique phenotypes, they have similar response rates to standard treatments such as chemotherapy and surgery suggesting that they may have a common progenitor, which we seek to identify. Methods In order to determine the OS cell of origin, we first performed flow cytometry analysis using cell surface markers that are differentially expressed on mesenchymal stem cells (MSC) and osteoblasts (OB)—CD44, CD105, CD54, CD49b, CD325, and GD2. MSCs were differentiated into OBs using induction media and cells were collected for analysis at multiple time points in differentiation; day (d)0, d3, d5, d10, d15, and d20. MSCs became fully differentiated OBs by d20, as determined by alizarin red staining. Similar flow cytometry analysis was performed on four OS standard cell lines, SaOS, U2OS, HOS, and HOS-143B, and marker profiles were compared to MSC to OB differentiation. Results CD44 and CD105 expression, both of which are known MSC markers, was high in MSCs and immediately dropped off during differentiation, while decrease in CD325 expression was more gradual. CD49b expression increased over time and GD2 expression varied greatly. CD54 expression peaked at d10 and decreased as differentiation continued. Expression of these markers was varied in the OS standard cell lines. These markers can be used to sort out specific populations of cells at different time points during differentiation. Conclusions and Future Directions In this study we have identified potential markers of OB progenitor populations and compared their expression to OS standard cell lines. We will use these prospective makers to sort progenitor populations and drive their differentiation into OBs, chondroblasts, and fibroblasts in order to determine branch points in MSC differentiation. Finally, in order to assess the potential of these cells to form OS, we plan to transform candidate progenitor cells with human telomerase reverse transcriptase, simian virus 40 large T antigen, and lentivirus containing oncogenic H-Ras serially. Citation Format: Pratistha Koirala, Vincent Poon, Sajida Piperdi, Amy Park, Michael Fremed, Michael Roth, Jonathan Gill, Richard Gorlick. Utilizing cell surface markers to define osteosarcoma and the stages of osteoblast differentiation. [abstract]. In: Proceedings of the 106th Annual Meeting of the American Association for Cancer Research; 2015 Apr 18-22; Philadelphia, PA. Philadelphia (PA): AACR; Cancer Res 2015;75(15 Suppl):Abstract nr 1412. doi:10.1158/1538-7445.AM2015-1412

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.104
GPT teacher head0.386
Teacher spread0.281 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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