MétaCan
Menu
← Back to cohort

Age Related Changes in Hoechst 33342 Efflux Dynamics and Side Population Phenotype in Murine Bone Marrow.

2004· article· en· W2575952335 on OpenAlexaff
Matthew Greenwood, Peter M. Lansdorp

Bibliographic record

VenueBlood · 2004
Typearticle
Languageen
FieldMedicine
TopicDrug Transport and Resistance Mechanisms
Canadian institutionsUniversity of British ColumbiaTerry Fox Research Institute
Fundersnot available
KeywordsSide populationBiologyStem cellPopulationPhenotypeHaematopoiesisBone marrowAbcg2Molecular biologyATP-binding cassette transporterCell biologyImmunologyTransporterCancer stem cellBiochemistryMedicine

Abstract

fetched live from OpenAlex

Abstract The mechanisms underlying the aging of the hematopoietic stem cell (HSC) compartment remain poorly understood. The ATP-binding cassette cell surface transport protein, ABCG2, has been identified as the transporter responsible for Hoechst 33342 (Hst) efflux in primitive stem cells and its expression is associated with the side population (SP) phenotype in both murine and human bone marrow (BM). ABCG2 expression and Hst efflux activity is highest in those cells with the greatest repopulating potential and is progressively downregulated during differentiation. The substrate profile of ABCG2, which includes a number of antineoplastic drugs, protoporphyrin IX and the chlorophyll breakdown product pheophorbide, suggest that ABCG2 transporters may function to protect stem cells from cytotoxic insults, a function which may be of great importance in stem cell maintenance. Amongst laboratory mice, the C57BL/6 strain is the longest lived and appears to accumulate HSC’s with age as assessed by both phenotype and colony forming assays. While the phenotypic features of the SP profile have been well characterized in both humans and young mice, little is known of the Hst efflux dynamics or phenotype of the SP profile in old and very old C57BL/6 mice. In order to further characterize the SP profile in old mice, whole BM was extracted from the femurs, tibiae, pelvis and thoracolumbar vertebral bodies of young (9–13 week) and old (95–108 week) C57BL/6 (Ly5.1) mice. Cells were stained with 5μg/ml Hst followed by staining with a combination of CD45.1 FITC, Sca1 PE, c-kit APC, CD34 FITC, biotinylated CD34 and lineage markers and strep PE-Texas Red. In addition, serial sampling of Hst incubated cells was performed to assess Hst efflux activity at 20 mins incubation through to 100mins. Six-color flow analysis was performed on a FACS Vantage™ (BD) cytometer and data analyzed using FlowJo™ software. Results show a marked increase in cells with an SP phenotype in old vs young mice (mean±SD 1.85%±0.88 vs 0.15%±0.09) which were more highly enriched for CD34-Sca1+ckit+ (22.2%±8.65 vs 8.89%±6.7) cells. Subdividing the SP profile into four regions (R1 to R4) from highest to lowest Hst efflux activity revealed that in old mice, SP cells with the highest Hst efflux activity were almost exclusively of a CD34-Sca1+ckit+ phenotype (82.3%±14.0 vs 11.5%±7.8), with a decreasing proportion of these cells represented throughout the remaining SP tail, though a significant proportion of cells within R4 remain CD34-Sca1+ckit+ (15.3%±7.83 vs 4.19±3.01). Similar patterns have been observed in both whole and lineage depleted BM. In addition, BM cells from old C57BL/6 mice show prolonged Hst efflux activity with an increase in cells in the SP gate at 100 mins (1.51%±0.50 vs 0.10%±0.06). We conclude that in old C57Bl/6 mice, cells accumulate which have the capacity to efflux Hst in agreement with previous reports of an increase in HSC number with age in this mouse strain.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.216
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2004
Admission routes1
Has abstractyes

Explore more

Same venueBlood→Same topicDrug Transport and Resistance Mechanisms→French-language works237,207→