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Metabolomic Biomarkers As Predictors of Iron Load and Oxidative Damage in Iron Overloaded Thalassemia Patients

2012· article· en· W2577683663 on OpenAlexaff
Farzana Sayani, Ying Zhang, Niloufar Abdolmohammadi, Anne Marie Lauf, Patricia Evans, John B. Porter, Aalim M. Weljie

Bibliographic record

VenueBlood · 2012
Typearticle
Languageen
FieldMedicine
TopicIron Metabolism and Disorders
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsMetabolomicsThalassemiaOxidative stressMetaboliteLipid peroxidationHemochromatosisDNA damageMedicineOxidative phosphorylationInternal medicineHereditary hemochromatosisBiochemistryBioinformaticsBiology

Abstract

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Abstract Abstract 3265 Introduction: The clinically significant forms of thalassemia are associated with transfusional and non-transfusional iron overload (IO). IO contributes to cirrhosis, cardiac failure and endocrinopathies, amongst other complications. Despite advances in iron load monitoring and chelation therapy, patients still continue to be at risk of iron-associated complications. Free iron leads to production of reactive oxygen species and oxidative damage of lipids, proteins, and DNA, resulting in apoptosis and organ damage. Tools that allow for early detection of iron associated changes and toxicities may allow for earlier clinical intervention. Thalassemia major (TM) patients have increased levels of the lipid peroxidation marker malondialdehyde (MDA), which decreases with chelation therapy. The DNA oxidative damage marker, 8-hydroxy-2'-deoxyguanosine (8-OHdG) has not been studied in thalassemia patients. Iron associated oxidative damage has been shown to affect cell and organelle membranes, affect glucose and lipid homeostasis, and contribute to inflammation, fibrosis and organ damage. We hypothesized that metabolomics technologies that assess changes in global metabolite profiles (metabolism of sugars, lipids, amino acids etc) may have a role to play as biomarkers of iron load, organ damage, or therapeutic response. Aims: 1) To use metabolomics technologies to determine if we can identify metabolite profile differences between thalassemia patients and control individuals, 2) To examine 8-OHdG levels as a marker of DNA oxidative damage in thalassemia, 3) To use metabolomics technologies to investigate for correlations between metabolite profiles and markers of iron load and oxidative damage. Methods: 24 subjects were enrolled with a mean age of 34 years (7 TM, 2 thalassemia intermedia (TI), 2 hemoglobin H disease (HbH) and 1 pure red cell aplasia, and 12 age and sex matched controls). Iron load was assessed with serum ferritin, non-transferrin bound iron (NTBI), LIC by magnetic resonance imaging (MRI), and cardiac MRI T2*. Serum and urine samples were collected at baseline, as well as 6 and 12 months. Serum MDA and urinary 8-OHdG were measured and correlated with iron load markers. Mass spectrometry metabolomics data of serum samples were analyzed using supervised multivariate regression techniques to identify relations to markers of iron load, oxidative damage and disease. Results: Serum ferritin and NTBI were significantly higher in the IO group compared to controls (p < 0.05). The mean LIC was 8.42 +/− 6.17 mg iron/gm dry weight and mean cardiac T2* was 31 +/− 17.03 ms in the study group. Serum MDA (0.021 +/− 0.01 vs 0.012 +/− 0.003 mmol/g protein, p < 0.001) and urinary 8-OHdG (17.26 +/− 8.61 vs 2.49 +/− 1.13 ng/mg Cr, p < 0.001) were significantly increased in iron-overloaded patients. Metabolite profiling of baseline serum revealed a significant difference in the IO group compared to controls (p = 0.006, R2 = 0.929). Significantly distinct metabolite profiles reflected the 3 distinct types of thalassemias (TM, TI, HbH) and different chelation therapy regimens. There was a significant relationship between serum metabolite profiles and markers of iron load including serum ferritin, LIC, and cardiac T2* (p < 0.05). A significant relationship was seen between serum metabolite profiles and, i) MDA (p = 0.007) and ii) urinary 8-OHdG (p = 0.01). Predictive models identified a profile of 19 different features that were predictive of serum MDA levels, and a profile of 52 unique features that were predictive of serum 8OHdG levels. The relationship of metabolite profiles to oxidative damage markers was more robust when reanalyzed based on chelator status (deferasirox vs non-deferasirox). Conclusion: Markers of oxidative damage are increased in iron overloaded thalassemia patients, with the first report of elevated 8-OHdG in this population. Metabolomics identifies different metabolite profiles between iron overloaded thalassemia patients and controls. Unique serum metabolite profiles show relationships with iron load, markers of lipid and DNA oxidative damage, type of thalassemia, and chelation therapy. These metabolite profiles may have the potential to serve as biomarkers for diagnosis, prognosis, organ damage, and therapeutic response in iron loaded thalassemia patients. Disclosures: No relevant conflicts of interest to declare.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.236
Teacher spread0.229 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2012
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