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Association of Cth Genetic Variant with Veno-Occlusive Disease in Children Receiving Intravenous Busulfan Before Hematopoietic Stem Cell Transplantation.

2012· article· en· W2582023351 on OpenAlexaff
Patricia Huezo-Diaz, Chakradhara Rao Uppungunduri, Anuj Tyagi, Mohamed Aziz Rezgui, Fabienne Gumy‐Pause, Michel Duval, Henrique Bittencourt, Maja Krajinović, Marc Ansari

Bibliographic record

VenueBlood · 2012
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGlutathione Transferases and Polymorphisms
Canadian institutionsCentre Hospitalier Universitaire Sainte-Justine
Fundersnot available
KeywordsToxicityBusulfanTransplantationMedicineHematopoietic stem cell transplantationInternal medicineGlutathionePharmacologyHepatic veno-occlusive diseaseGastroenterologyOncologyBiologyBiochemistry

Abstract

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Abstract Abstract 3025 Background: Busulfan (Bu) is a key compound given prior to hematopoietic stem cell transplantation (HSCT), in children. Bu has a narrow therapeutic index, where high Bu exposure often leads to increased risk of veno-occlusive disease (VOD), whereas low Bu exposure has been associated with a higher risk of disease recurrence and graft failure. Interindividual differences in drug response are an important cause of resistance to treatment and toxicity. Identifying pharmacogenetic determinants of a given drug may allow for prospective identification of patients with suboptimal drug responses allowing for complementation of traditional treatment protocols by genotype-based drug dose adjustment. Bu is primarily eliminated via the GSH conjugation in the liver, catalyzed by glutathione s-transferases (GSTs). The Bu glutathione conjugate is then converted to tetrahydrothiophene by cystathionine gamma lyase (CTH). CTH is mainly expressed in the liver and is also essential for glutathione synthesis. Any defective function with CTH could reduce Bu's elimination by preventing its metabolite formation or by decreasing the amount of glutathione needed for conjugation. Thus we investigated the relationship between genetic variants of CTH and HSCT-related toxicity. Hypothesis: A defective function (caused by genetic variants) of CTH will reduce Bu's metabolism resulting in increased toxicity. Sample and Methods: The study was performed on sixty six pediatric patients (50% males, mean age 7.8yrs) who underwent allogeneic HSCT with intravenous BU as part of a myeloablative conditioning regimen. Bu dose was adjusted to target Css of 600–900 ng/ml and ursodeoxycholic acid was provided as a prophylaxis for VOD. Genomic DNA collected prior to myeloablation was used for genotyping rs1021737, using a Taqman SNP genotyping Assay. Rs1021737 is a common non-synonymous SNP, with a 1364G>T transition, resulting in a Ser403Ile (S403I) mutation. In Caucasians this SNP has the following frequencies: GG (54%), GT (38%) and TT (7%). We used PANTHER, a computational method designed to predict the biological impact of SNPs and rs1021737 was predicted to be deleterious. Results: Patients were followed for up to 5yrs. Neutrophil, platelet recoveries, grade 1–4 acute versus host disease, treatment related mortality incidences were 87.9, 84.9, 19.7 and 10.6%, respectively. Overall survival rate was 77%, Events free Survival resulted in 60.6%, while 21.2% of patients relapsed and 10.6% had primary or secondary graft failure. Incidence of VOD (Seattle criteria), hemorrhagic cystitis and lung toxicity were 12.1, 25.8 and 9.1% respectively. Genotype frequencies for rs1021737 within our sample were GG (54.5%), GT (40.9%) and TT (4.5%), similar to the general population. No association was found with clinical outcomes except with VOD. A Chi-Square test demonstrated that the homozygous TT genotype correlated with VOD (p=0.031), with an odds ratio of 19 (95% Confidence Interval; 1.5–241.7). We extended this analysis by performing a multidimensional reduction analysis which included: rs1021737 and GSTA1*B haplotype (a functional variant which has previously been associated with VOD in our sample). The analysis demonstrated that these two variants provided good predictability of VOD risk (accuracy =86%, specificity = 91%, sensitivity = 50%) with a Chi-square p=0.001 and odds ratio of 12.4 (2.36 – 65.13). Discussion and Conclusion: Our results suggest an association between CTH 1364G>T variant and VOD in children receiving IV Bu before HSCT. Loss of function of CTH may result in the accumulation of Bu and depletion of glutathione, which is involved in the removal of Bu, and thus homozygous TT individuals are at risk of VOD compared to GG or GT individuals. CTH is also vital in the production of Hydrogen Sulfide which is a protective factor in kidney and liver function. Diminished function of CTH results in cellular damage and inflammation and thus the pathogenesis of VOD may also be related to this biological mechanism. Furthermore, by including the CTH 1364G>T in a polygenic analysis, with the previously associated GSTA1*B, the predictability of VOD improved. This study suggests that genes involved in the metabolism of Bu may help in identifying patients at risk of developing VOD and who will therefore need a better VOD prophylaxis, maybe by administering defibrotide. A prospective multicentre study is ongoing to confirm these results. Disclosures: No relevant conflicts of interest to declare.

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How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.035
Threshold uncertainty score0.531

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.003
GPT teacher head0.177
Teacher spread0.175 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Published2012
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