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Record W2591807887 · doi:10.22489/cinc.2016.073-152

An Algorithm for Fitting Local Membrane Parameters to an Action Potential Duration Map in a Tissue with Electrotonic Interactions

2016· article· en· W2591807887 on OpenAlexafffund
Angelina Drahi, Akshay Kota Aswath Kumar, Vincent Jacquemet

Bibliographic record

VenueComputing in cardiology · 2016
Typearticle
Languageen
FieldMedicine
TopicCardiac electrophysiology and arrhythmias
Canadian institutionsHôpital du Sacré-Cœur de MontréalUniversité de MontréalMontfort Hospital
FundersNatural Sciences and Engineering Research Council of CanadaMitacs
KeywordsAction (physics)Duration (music)Computer scienceBiological systemAlgorithmPhysicsBiologyAcoustics

Abstract

fetched live from OpenAlex

Repolarization gradients contribute to arrhythmogenicity.They can be introduced in computer models of cardiac tissue by locally adjusting an intrinsic parameter of the membrane model.Electronic coupling, however, modulates the dispersion of action potential duration (APD).We developed an algorithm based on a modified Newton method to iteratively adjust the spatial distribution of a membrane parameter in order to reproduce a given APD map in a coupled tissue.The method was applied to an atrial model with randomly generated APD maps with controllable maximum APD gradient.The adjustable local parameter was the conductance of the I K,ACh current.Convergence was found to be faster when the maximal gradient was less steep and when tissue conductivity was reduced.This algorithm provides a tool to automatically generate arrhythmogenic substrates with controllable repolarization gradients and possibly incorporate experimental APD maps into computer models.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.006
Threshold uncertainty score0.021

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0060.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.312
Teacher spread0.299 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2016
Admission routes2
Has abstractyes

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