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Record W2593498967 · doi:10.1055/s-0035-1556380

Structure elucidation and biological activities of two classes of peptides produced by the actinomycete, Kitasatospora cystarginea

2015· article· en· W2593498967 on OpenAlexaff
Krista A. Gill, Fabrice Berrué, Russell G. Kerr

Bibliographic record

VenuePlanta Medica · 2015
Typearticle
Languageen
FieldMedicine
TopicPeptidase Inhibition and Analysis
Canadian institutionsUniversity of Prince Edward Island
Fundersnot available
KeywordsLipopeptideActinobacteriaBioassayPeptideStereochemistryProteasomeCyclic peptideComputational biologyChemistryBiologyBiochemistryBacteria

Abstract

fetched live from OpenAlex

Kitasatospora is a rare genus of Actinobacteria that represents an underexplored resource for the discovery of structurally diverse natural products. To highlight the production of unique metabolites produced by twelve members of this genus, the chemical screening method that combines LC-HRMS with Principal Component Analysis (PCA) was used. This approach identified the production of three novel compounds by K. cystarginea; which were determined to be a lipopeptide and two β-lactone containing peptide analogs, referred to as cystargamide and cystargolides A and B. Their structures were elucidated using NMR and MS/MS, and absolute configurations using advanced Marfey's Method. The therapeutic potential of cystargamide and cystargolides A and B were evaluated in several bioassays. Most notably, cystargolides A and B displayed inhibition of human 20S proteasome with IC50 values of 0.35 and 0.93µM respectively.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.063
Threshold uncertainty score0.232

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.031
GPT teacher head0.285
Teacher spread0.254 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2015
Admission routes1
Has abstractyes

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