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Liver‐Directed Knockout and Transgene Delivery of Arginase‐1 in Mice

2016· article· en· W2593509033 on OpenAlexaffabout
Colin Funk, Laurel L. Ballantyne, Andreas Schulze

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAmino Acid Enzymes and Metabolism
Canadian institutionsHospital for Sick ChildrenQueen's University
Fundersnot available
KeywordsArginaseCre recombinaseBiologyTransgenePhenotypeUrea cycleKnockout mouseConditional gene knockoutOrnithine transcarbamylaseMolecular biologyGenetically modified mouseGeneCancer researchArginineGenetics

Abstract

fetched live from OpenAlex

Arginase‐1 (Arg1) catalyzes the distal step in the liver‐based urea cycle that converts arginine to urea and ornithine. Genetic deficiency of this enzyme in humans, unlike proximal urea cycle disorders that lead to hyperammonemia and neonatal crisis, leads to neurological deficits (e.g. spastic diplegia) that manifest around 2–4 years of age and progress throughout childhood. We previously generated a tamoxifen‐inducible Arg1 deficient mouse model (Arg1‐Cre) that leads to a phenotype much more severe than in humans with lethality occurring ≈2 weeks after loss of enzyme function. The purpose of this study was to evaluate if liver‐selective Arg1 loss is sufficient to recapitulate the phenotype observed in global Arg1 knockout mice, as well as to gauge the effectiveness of a gene therapy protocol to rescue the phenotype. Liver‐selective Arg1 deletion was induced by using an adeno‐associated viral (AAV)‐thyroxine binding globulin (TBG) promoter‐Cre recombinase vector (1.5×10 11 genome copies (g.c.), intraperitoneally (i.p.) injected) administered to mice (n=6) with loxP sites flanking exons 7 and 8 of the Arg1 gene (Arg1 floxed mice; Arg1 fl/fl ). An AAV vector expressing an Arg1‐enhanced green fluorescent protein (Arg1‐eGFP) transgene from a strong promoter (hybrid cytomegalovirus enhancer/chicken β‐actin) was used in a gene therapy approach to “rescue” tamoxifen‐treated Arg1‐Cre mice. The results indicate that liver‐selective loss of Arg1 (>95 % deficient) leads to a phenotype resembling the whole body knockout of Arg1 with lethality around 2 weeks after Cre‐induced gene disruption in all mice. Delivery of Arg1‐eGFP AAV (n=10 male; 1.5×10 11 g.c. i.p. administered 2 weeks prior to tamoxifen treatment) rescues ≈ half of Arg1 global knockout mice (survival >4 months) but a significant proportion still succumb to the enzyme deficiency even though liver expression and enzyme activity of the fusion protein reach levels approaching that found in wild‐type animals. This raises a conundrum relating to liver‐specific expression of Arg1. On the one hand, loss of expression in this organ appears to be both necessary and sufficient to explain the lethal phenotype of the genetic disorder in mice. On the other hand, the gene therapy rescue studies suggest that loss of extra‐hepatic Arg1 expression factors into disease etiology. Further studies will be necessary to illuminate the detailed mechanisms for pathogenesis of Arg1‐deficiency. Support or Funding Information Canada Research Chairs Program

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.023

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0030.003
Insufficient payload (model declined to judge)0.0070.004

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.211
Teacher spread0.203 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes2
Has abstractyes

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