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Record W2595807222 · doi:10.4172/2161-0398.1000227

Conformational Study of Cannabinoid Docking to Cannabinoid Receptor 1 (CB1) via Linear and Nonlinear Circular Dichroism

2017· article· en· W2595807222 on OpenAlexfundno aff
Julie Donnelly, Hernández FE

Bibliographic record

VenueJournal of Physical Chemistry & Biophysics · 2017
Typearticle
Languageen
FieldChemistry
TopicMolecular spectroscopy and chirality
Canadian institutionsnot available
FundersUniversity of South FloridaCanadian Centre for Applied Research in Cancer ControlNational Science Foundation
KeywordsChemistryCannabidiolCannabinoidCircular dichroismDocking (animal)Cannabinoid receptorStereochemistryReceptorTetrahydrocannabinolCannabisBiochemistryPsychologyAgonist

Abstract

fetched live from OpenAlex

The exact mechanism of binding of (-)-trans-Δ9-tetrahydrocannabinol (the main psychoactive component of marijuana) to the cannabinoid receptor, CB1, is unknown. Conformational information of the cannabinoids may give insight to this mechanism and the elicited effects of consumption. Herein, we report on the theoretical conformational study of Δ9-tetrahydrocannabinol (Δ9-THC) and cannabidiol (CBD), the psychoactive and a non-psychoactive compound found in marijuana, respectively, using electronic circular dichroism (ECD) and two-photon circular dichroism (TPCD). The compounds were optimized in vacuo and in the receptor site using DFT and B3LYP with the 6-311G** basis set and spectra were calculated using the same level of theory, but with the 6-311++G** basis set. First, we present and discuss the comparison of experimental and theoretical ECD spectra of (-)-trans-Δ9-THC and CBD in methanol solution in order to corroborate our theoretical approach. Second, we show, theoretically, the enhanced sensitivity of TPCD compared with ECD to conformational changes of cannabinoids upon docking, giving rise to a potential application in vivo. Finally, the comparative analysis of the theoretical TPCD spectra of Δ9-THC and CBD show distinct fingerprints in the far-UV region for two conformers of each molecule, which may help to understand the specific binding mechanisms of these species to the cannabinoid receptors and to describe the difference in psychological effects upon consumption. Our results show the complementarity of these two spectroscopic techniques and the potential of TPCD to determine the conformational changes of cannabinoids upon docking to the CB1 receptor.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.280
Teacher spread0.270 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2017
Admission routes1
Has abstractyes

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