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Discordance of oncologic surgical classifications in COG studies.

2013· article· en· W2597850117 on OpenAlexaff
Carol D. Morris, Lisa A. Teot, Mark L. Bernstein, Neyssa Marina, Mark Krailo, Doojduen Villaluna, Richard Görlick, R. Lor Randall

Bibliographic record

VenueJournal of Clinical Oncology · 2013
Typearticle
Languageen
FieldMedicine
TopicCancer Diagnosis and Treatment
Canadian institutionsIzaak Walton Killam Health Centre
Fundersnot available
KeywordsMedicineCogSurgeryRadical surgeryResectionResection marginGeneral surgeryCancerInternal medicine

Abstract

fetched live from OpenAlex

10528 Background: “Wide resection” (a cuff of normal tissue) versus “radical resection” (the entire compartment) indicate very distinct oncologic surgical procedures and hence potential margin status. Distinguishing between these two oncologic classifications is important for understanding oncologic outcomes. Methods: We examined the available data for COG AOST0331: A Randomized Trial of the European and American Osteosarcoma Study Group to Optimize Treatment Strategies for Resectable Osteosarcoma Based on Histological Response to Pre-Operative Chemotherapy. We reviewed the surgical and pathology reports of patients considered to have received a wide or radical resection according to the investigator at the patient’s institution. Results: In 956 patients, the overall discordance rate was 43%. Of those patients reported to have had a wide excision by the reporting institution, only 5% of patients were reclassified to radical resection. However, of those patients reported to have undergone radical resection, 75% were reclassified to wide. In the absence of this re-review of the data, 56% of the patients would have been reported to have had a radical resection when in fact only 17% met the criteria for true radical resection. The greater number of patient reclassified to wide from radical is likely indicative of the influence and limits of the CPT coding system currently used for billing by surgeons; only CPT codes for radical resection currently exist. Conclusions: These discrepancies complicate subsequent data analysis, particularly assessing predictors of local recurrence. While this reporting problem is not unique to COG studies, we aim to use this example to raise awareness among our colleagues about the importance of accurate data reporting. Providing better training to those individuals responsible for submitting data may decrease the incidence of erroneous data entry and is essential to the successful completion of study objectives.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.181
Threshold uncertainty score0.283

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.394
GPT teacher head0.585
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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