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Record W2609023706

An investigation into distribution of serotypes and antimicrobial resistance patterns of Streptococcus suis isolates from clinical cases and healthy carrier pigs

2017· dissertation· en· W2609023706 on OpenAlexfundno aff
Emily Arndt

Bibliographic record

VenueThe Atrium (University of Guelph) · 2017
Typedissertation
Languageen
FieldMedicine
TopicStreptococcal Infections and Treatments
Canadian institutionsnot available
FundersOntario Ministry of Agriculture, Food and Rural AffairsJohns Hopkins University
KeywordsStreptococcus suisSerotypeMicrobiologyAntimicrobialAntibiotic resistanceBiologyDistribution (mathematics)AntibioticsVirulenceMathematicsGenetics
DOInot available

Abstract

fetched live from OpenAlex

The distribution of Streptococcus suis serotypes and antimicrobial resistance patterns in clinical cases and healthy carrier pigs was investigated. Isolates were confirmed as S. suis by various biochemical techniques and serotyped using multiplex PCR amplification. Antimicrobial susceptibility testing was performed using the disk diffusion method. Recovery of S. suis was more likely in samples from suckling and nursery piglets than from sows and finishers (P <0.001), and more commonly recovered from healthy pigs as opposed to sick pigs (P <0.01). Samples from pigs in a continuous flow system were more likely to be found to be S. suis positive than those from pigs in an all-in/all-out system (P <0.01). Twenty-two different serotypes were identified, with types 5, 9, and 31 being the most common types isolated. Most isolates (94.5%) were resistant to at least one antimicrobial agent. A low prevalence of resistance was seen against ampicillin, ceftiofur, and florfenicol (<1.0%), while a high prevalence of resistance against tetracycline (84.2%), tiamulin (65.2%), and spectinomycin (40.4%) and an intermediate level of resistance to trimethoprim/sulfa (13.2%) was identified.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.003
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.004
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.003
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0040.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0000.001
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.306
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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