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Record W2611948849 · doi:10.11575/prism/28099

The Effects of Diet, Body Composition and Exercise on The Serum Metabolome in Health and Disease

2017· dissertation· en· W2611948849 on OpenAlexfundno aff
Marie Palmnäs

Bibliographic record

VenuePRISM (University of Calgary) · 2017
Typedissertation
Languageen
FieldHealth Professions
TopicHealth and Wellbeing Research
Canadian institutionsnot available
FundersKarolinska InstitutetAlberta Cancer Foundation
KeywordsMetabolomeComposition (language)DiseaseMedicinePhysiologyBiologyMetabolomicsBioinformaticsInternal medicine

Abstract

fetched live from OpenAlex

The serum metabolite profile reflects a great variety of factors including age, gender, diet, exercise, gut microbial metabolism and the presence of disease. Importantly, changes in the serum metabolome may appear prior to the clinical manifestation of disease, provide insight into underlying biological mechanisms and be predictive of disease progression and/or amelioration. Using an animal model and human participants, the serum metabolome of obesity was studied in relations to diet and physical activity. In brief, obese rats consuming coffee had a favorable body composition, lower liver triglycerides and decreased serum concentrations of branched-chain amino acids, which are thought to cause diabetes when present at higher concentrations, compared to controls. In contrast, aspartame consuming rats showed impairments in glucoregulation. Our findings suggested that this might have been a result of aspartame causing an increase in the proportion of gut bacteria that produce propionate, a metabolite known to stimulate hepatic gluconeogenesis. In human subjects, obesity and metabolic syndrome risk factors were associated with lower concentrations of the sphingolipid precursors serine and glycine. Higher activity energy expenditure and physical activity levels showed the opposite association. Physical activity may thus improve on insulin sensitivity by reducing de novo synthesis of sphingolipids and their subsequent accumulation in insulin-sensitive tissues. Exercise also associated with improvements in body weight, lean mass, physical performance and symptom severity, following cancer treatment in head and neck cancer patients. However, none of these factors correlated with their 2-year survival. Instead, the baseline serum metabolite profile differentiated between survivors and nonsurvivors, despite matching for patient characteristics. Thus, serum metabolites show potential as prognostic biomarkers for head and neck cancer patients. Lastly, we found that combining three metabolomics approaches resulted in the most comprehensive coverage of metabolite classes and the most complete description of the phenotype, for women with ovarian cancer. This Chapter also highlighted the need to address the influence of common risk factors on the serum metabolome. Taken together, the work presented in this thesis has provided further insight into the serum metabolite profile of metabolic disease and cancer in the context of diet and physical activity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.334
Teacher spread0.318 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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