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Record W2614782423 · doi:10.2135/cropsci2016.12.0976

Reliability of Measurement and Genotype × Environment Interaction for Potato Specific Gravity

2017· article· en· W2614782423 on OpenAlexaff
Yi Wang, Lance B. Snodgrass, Paul C. Bethke, Alvin J. Bussan, David G. Holm, Richard G. Novy, Mark J. Pavek, Gregory A. Porter, Carl J. Rosen, Vidyasagar Sathuvalli, Asunta L. Thompson, Michael T. Thornton, Jeffrey B. Endelman

Bibliographic record

VenueCrop Science · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogens and Resistance
Canadian institutionsGreenfield Research (Canada)Kimberly-Clark (Canada)
FundersWisconsin Potato and Vegetable Growers Association
KeywordsBiologyRepeatabilityGermplasmGenotypeGene–environment interactionBiotechnologyStatisticsAgronomyVeterinary medicineGeneticsMathematicsGene

Abstract

fetched live from OpenAlex

Specific gravity (SpGr) is often used to measure the processing quality of potato ( Solanum tuberosum L.) tubers for French fries or potato chips because of its strong correlation with dry matter content and ease of measurement. For French fry processing genotypes, the desirable range for mean SpGr is typically 1.080 to 1.095, and a small variance around the mean is essential for product uniformity. Two multi‐year, multi‐location trials were conducted to investigate the genetics of SpGr in elite russet germplasm. Consistent with earlier studies, the mean SpGr was measured with high repeatability within each environment: the median plot‐basis value was 0.83 for a national trial with six locations and 3 yr. In contrast, the median repeatability of the SD between tubers was only 0.21. Thus, multi‐environment trials are needed to identify genotypes with a narrow SpGr distribution. Finlay–Wilkinson stability analysis of the mean SpGr established one genotype as an outlier: when best linear unbiased predictions were regressed on the environment means, this genotype had a regression coefficient of 2.1, compared with 0.4 to 1.4 for the others. The genetic correlation between environments showed a consistent regional pattern in mean SpGr over the years. There was a higher mean correlation between environments within the Pacific Northwest (0.97), Upper Midwest (0.91), and Northeast (0.85) than between environments from the different regions (0.35–0.78). Although breeding for national adaptation is an attractive idea, our results suggest that genetic gain may be easier to achieve at the regional level.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.010
metaresearch head score (Gemma)0.015
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.010
Threshold uncertainty score0.054

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0100.015
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.049
GPT teacher head0.240
Teacher spread0.192 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations16
Published2017
Admission routes1
Has abstractyes

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