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Record W2623158955 · doi:10.2527/asasann.2017.612

612 Effects of the seaweed Ascophyllum nodosum on the rumen microbiome and fecal pathogenic Escherichia coli serotypes in sheep

2017· article· en· W2623158955 on OpenAlexaff
Mi Zhou, M. Huenerberg, Yongyan Chen, Tim Reuter, Tim A. McAllister, Franklin Evans, Le Luo Guan

Bibliographic record

VenueJournal of Animal Science · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicRuminant Nutrition and Digestive Physiology
Canadian institutionsAcadian Seaplants (Canada)Agriculture and Agri-Food CanadaUniversity of Alberta
Fundersnot available
KeywordsAscophyllumBiologyRumenPopulationEscherichia coliFecesMicrobiologyMicrobiome16S ribosomal RNABacteriaBotanyFermentationFood scienceAlgaeGeneBiochemistry

Abstract

fetched live from OpenAlex

Feeding rams Tasco® (SW), a high quality, sun-dried seaweed meal produced from the brown macroalga Ascophyllum nodosum, reduced Escherichia coli O157:H7 shedding in feces without affecting rumen fermentation. The effects of SW on the microbiota and other pathogenic E. coli O-serotypes in the rumen have not been extensively studied. The current study aimed to evaluate the effects of Tasco® at different feeding levels on the rumen microbiome as well as the presence of non-O157 E. coli serotypes. A 4 × 4 Latin square design used 8 ram lambs randomly allocated to diets containing 0%, 1%, 3%, or 5% of the diet DM as SW. Rumen contents and feces were collected, DNA was extracted, and 16S rRNA was sequenced to study the ecology of bacterial and archaeal communities using QIIME. Functional pathways were predicted using PICRUSt, and seven E. coli serotypes were measured using multiplex PCR. Feeding SW linearly (P < 0.001) lowered the total rumen bacterial population (log10 16S rRNA gene copies/g) from 11.63 in Con to approximately 10.50 and linearly reduced (P < 0.001) the total archaeal population from 8.70 to 8.13. Different SW levels did not affect the overall bacterial and archaeal profiles or the microbial diversity indices, with substantial variation in these parameters among individual rams. Relative abundance of three bacteria phyla, five bacteria families, and seven species differed among SW levels. There were 14 enriched metabolic pathways in SW-fed rams, while only 3 pathways were suppressed by SW feeding. A VFA profile with a higher acetate molar portion (P < 0.001) and a lower propionate (P < 0.001) and butyrate (P < 0.001) molar portion was seen with SW supplement, and the lower butyrate can be associated with the enrichment of the “Butanate metabolism' pathway in the SW-fed rams. Total E. coli population within the rumen was linearly reduced (P < 0.001) by SW from 6.82 (log10 16S rRNA gene copies/g) in Con to 6.27, 5.86, and 5.90 with the three SW levels. Including SW only completely eliminated O121 in the rumen and the feces, but O45, O103, and O111 were also eliminated in the feces, although they were detected in the rumen.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.235
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2017
Admission routes1
Has abstractyes

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