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Record W2625940930 · doi:10.1038/ncomms15805

Genetic loci associated with heart rate variability and their effects on cardiac disease risk

2017· review· en· W2625940930 on OpenAlexaff
Ilja M. Nolte, M. Loretto Muñoz, Vinicius Tragante, Azmeraw T. Amare, Rick Jansen, Ahmad Vaez, Benedikt von der Heyde, Christy L. Avery, Joshua C. Bis, Bram Dierckx, Jenny van Dongen, Stephanie M. Gogarten, Philippe Goyette, Jussi Hernesniemi, Ville Huikari, Shih-Jen Hwang, Deepali Jaju, Kathleen F. Kerr, Alexander Kluttig, Bouwe P. Krijthe, Jitender Kumar, Sander W. van der Laan, Leo‐Pekka Lyytikäinen, Adam X. Maihofer, Arpi Minassian, Peter J. van der Most, Martina Müller‐Nurasyid, Michel G. Nivard, Erika Salvi, James D. Stewart, Julian F. Thayer, Niek Verweij, Andrew Wong, Delilah Zabaneh, Mohammad Hadi Zafarmand, Abdel Abdellaoui, Sulayma Albarwani, Christine M. Albert, Álvaro Alonso, Foram N. Ashar, Juha Auvinen, Tomas Axelsson, Dewleen G. Baker, Paul I. W. de Bakker, Matteo Barcella, Riad Bayoumi, Rob J. Bieringa, Dorret I. Boomsma, Gabrielle Boucher, Annie Britton, Ingrid E. Christophersen, Andrea Dietrich, G. Ehret, Patrick T. Ellinor, Markku Eskola, Janine F. Felix, John S. Floras, Oscar H. Franco, Peter Friberg, Maaike G. J. Gademan, Mark A. Geyer, Vilmantas Giedraitis, Catharina A. Hartman, Daiane Hemerich, Albert Hofman, Jouke‐Jan Hottenga, Heikki V. Huikuri, Nina Hutri‐Kähönen, Xavier Jouven, Juhani Junttila, Markus Juonala, Antti M. Kiviniemi, Jan A. Kors, Meena Kumari, Tatiana Kuznetsova, Cathy C. Laurie, Joop D. Lefrandt, Yong Li, Yun Li, Duanping Liao, Marian C. Limacher, Henry J. Lin, Cecilia M. Lindgren, Steven A. Lubitz, Anubha Mahajan, Barbara McKnight, Henriette E. Meyer zu Schwabedissen, Yuri Milaneschi, Nina Mononen, Andrew P. Morris, Mike A. Nalls, Gerjan Navis, Melanie Neijts, Kjell Nikus, Kari E. North, Daniel T. O’Connor, Johan Ormel, Siegfried Perz, Annette Peters, Bruce M. Psaty, Olli T. Raitakari, Victoria B. Risbrough, Moritz F. Sinner, David S. Siscovick, Johannes H. Smit, Nicholas L. Smith, Elsayed Z. Soliman, Nona Sotoodehnia, Jan A. Staessen, Phyllis K. Stein, Adrienne M. Stilp, Katarzyna Stolarz‐Skrzypek, Konstantin Strauch, Johan Sundström, Cees A. Swenne, Ann-Christine Syvänen, Jean‐Claude Tardif, Kent D. Taylor, Alexander Teumer, Timothy A. Thornton, Lesley Tinker, André G. Uitterlinden, Jessica van Setten, Andreas Voss, Mélanie Waldenberger, Kirk C. Wilhelmsen, Gonneke Willemsen, Quenna Wong, Zhu-Ming Zhang, Alan B. Zonderman, Daniele Cusi, Michele K. Evans, Halina Greiser, Pim van der Harst, Mohammad Hassan, Erik Ingelsson, Marjo‐Riitta Järvelin, Stefan Kääb, Mika Kähönen, Mika Kivimäki, Charles Kooperberg, Diana Kuh, Terho Lehtimäki, Lars Lind, Caroline M. Nievergelt, Chris O’Donnell, Albertine J. Oldehinkel, Brenda W.J.H. Penninx, Alex P. Reiner, Harriëtte Riese, Arie M. van Roon, John D. Rioux, Jerome I. Rotter, Tamar Sofer, Bruno H. Stricker, Henning Tiemeier, Tanja G. M. Vrijkotte, Folkert W. Asselbergs, Bianca J.J.M. Brundel, Susan R. Heckbert, Eric A. Whitsel, Marcel den Hoed, Harold Snieder, Eco J. C. de Geus

Bibliographic record

VenueNature Communications · 2017
Typereview
Languageen
FieldMedicine
TopicHeart Rate Variability and Autonomic Control
Canadian institutionsUniversité de MontréalUniversity of TorontoUniversity Health NetworkMount Sinai HospitalMontreal Heart Institute
FundersNational Center for Advancing Translational SciencesNational Institute of Dental and Craniofacial ResearchNational Institute of Mental HealthNational Heart, Lung, and Blood InstituteGillings School of Public HealthNational Institute of Diabetes and Digestive and Kidney DiseasesKnut och Alice Wallenbergs StiftelseTurun Yliopistollinen KeskussairaalaTaysPaavo Nurmen SäätiöScience for Life LaboratoryUppsala Multidisciplinary Center for Advanced Computational ScienceUniversity of MiamiWetenschappelijk Onderzoek- en DocumentatiecentrumMarcus och Amalia Wallenbergs minnesfondHögskolan DalarnaSydäntutkimussäätiöUppsala UniversitetMedical Research CouncilNational Institute of General Medical SciencesLeids Universitair Medisch CentrumU.S. Department of Veterans AffairsEmil Aaltosen SäätiöVetenskapsrådetSultan Qaboos UniversityJuho Vainion SäätiöNational Center on Minority Health and Health DisparitiesHjärt-LungfondenDeutsche ForschungsgemeinschaftNederlandse Organisatie voor Wetenschappelijk OnderzoekOffice of Dietary SupplementsAcademy of FinlandUniversiteit LeidenRijksuniversiteit GroningenTampereen TuberkuloosisäätiöKelaEuropean Science FoundationNational Institute on Minority Health and Health DisparitiesErasmus Universitair Medisch Centrum RotterdamLandstinget DalarnasEuropean CommissionBritish Heart FoundationWellcome TrustErasmus Medisch CentrumVrije Universiteit AmsterdamUniversity of WashingtonYale UniversityFoundation for Cardiovascular ResearchNorthwestern UniversityNational Institutes of HealthSan Diego State UniversitySuomen KulttuurirahastoZonMwWomen's Health InitiativeYrjö Jahnssonin SäätiöNetherlands Heart InstituteUniversitair Medisch Centrum GroningenEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentU.S. Department of Health and Human Services
KeywordsSingle-nucleotide polymorphismHeart rate variabilityGenome-wide association studyQuantitative trait locusBiologyGeneticsGenetic variationGenetic associationExpression quantitative trait lociGeneHeart rateGenotypeBlood pressureEndocrinology

Abstract

fetched live from OpenAlex

Abstract Reduced cardiac vagal control reflected in low heart rate variability (HRV) is associated with greater risks for cardiac morbidity and mortality. In two-stage meta-analyses of genome-wide association studies for three HRV traits in up to 53,174 individuals of European ancestry, we detect 17 genome-wide significant SNPs in eight loci. HRV SNPs tag non-synonymous SNPs (in NDUFA11 and KIAA1755 ), expression quantitative trait loci (eQTLs) (influencing GNG11 , RGS6 and NEO1 ), or are located in genes preferentially expressed in the sinoatrial node ( GNG11 , RGS6 and HCN4) . Genetic risk scores account for 0.9 to 2.6% of the HRV variance. Significant genetic correlation is found for HRV with heart rate (−0.74< r g <−0.55) and blood pressure (−0.35< r g <−0.20). These findings provide clinically relevant biological insight into heritable variation in vagal heart rhythm regulation, with a key role for genetic variants ( GNG11 , RGS6) that influence G-protein heterotrimer action in GIRK-channel induced pacemaker membrane hyperpolarization.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Meta-analysis · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0020.001
Bibliometrics0.0020.002
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.337
Teacher spread0.304 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designMeta-analysis
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations164
Published2017
Admission routes1
Has abstractyes

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