A New Species of the Freshwater Cladoceran Genus Scapholeberis Schoedler, 1858 (Cladocera: Anomopoda) from the Semidesert Northern Mexico, Highlighted by DNA Barcoding
Bibliographic record
Abstract
Sequencing of the CO1 mitochondrial gene (barcoding) highlighted a possible different species in the semi-desert region of Mexico. After a detailed morphological analysis we describe Scapholeberis duranguensis n. sp. (Cladocera: Anomopoda: Daphniidae). Specimens from the type locality, El Chupadero, Durango, were compared with specimens of S. armata armata Herrick, 1882 and S. armata freyi Dumont and Pensaert, 1983 from Canada and southeastern, central and northern Mexico. The main characters that differentiate the new species are: (1) a thicker denticulate membrane with a conspicuous underlying hyaline membrane at the posterior rim of the valves, (2) fewer setae in the gnathobase of trunk limb II and (3) longer and more rectilinear ejector hooks in trunk limb I. The presence of a pore-like structure at the top of the head was also observed, however we are not certain whether this can be considered as a distinctive character, as it was not consistent in all SEM scanned organisms. The denticulate membrane, the number of setae in the gnathobase of trunk limb II and the length of the ejector hooks are characters shared with other species, however, the combination of them and in particular the structure and thickness of the double membrane at the posterior rim of the valves lead us to conclude that S. duranguensis is a species different from S. armata and from other members of this genus. The CO1 sequences of S. armata freyi and S. duranguensis n. sp. showed a mean divergence of 12.02%, thus supporting the morphological differences between them. Finally, a comparison of the CO1 sequences of Scapholeberis duranguensis n.sp. with other Scapholeberinae available in GenBank supported our results.
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How this classification was reachedexpand
Full frame distilled prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.
Codex and Gemma teacher scores by category
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.000 |
| Meta-epidemiology (narrow) | 0.000 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.000 | 0.000 |
| Science and technology studies | 0.000 | 0.000 |
| Scholarly communication | 0.000 | 0.000 |
| Open science | 0.001 | 0.000 |
| Research integrity | 0.000 | 0.000 |
| Insufficient payload (model declined to judge) | 0.003 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one teacher head, not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".