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Record W26626076 · doi:10.1016/j.bbrc.2015.11.060

Genetic variability between populations of the critically endangered frog Microbatrachella capensis, Boulenger 1910 (Anura: Ranidae: Cacosterninae)

2005· dissertation· en· W26626076 on OpenAlexfundno aff
Lindsey Noel Will

Bibliographic record

VenueBiochemical and Biophysical Research Communications · 2005
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsnot available
FundersNational Heart, Lung, and Blood InstituteNatural Sciences and Engineering Research Council of CanadaCanadian Institutes of Health ResearchGriffith University
KeywordsBiologyEndangered speciesCritically endangeredZoologyEvolutionary biologyEcology

Abstract

fetched live from OpenAlex

The micro frog, Microbatrachella capensis (Boulenger, 1910), is a Critically Endangered anuran found in fragmented marshland habitats along the southern coast of the Western Cape Province of South Africa. The genetic diversity between and within the remaining populations (Kenilworth, Grootwitvlei, Kleinmond, Lamloch, Hagelkraal, and Buffeljacht/Ratelrivier) of Microbatrachella capensis in the Western Cape Province of South Africa was assessed, sampling 12 specimens from each population. Genetic diversity was determined from an analysis of mitochondrial DNA sequences obtained from the ND2 gene region/locus. A phylogeographic analysis of the populations of micro frogs sampled was used to determine the current genetic structure and the history of the species. The analysis divided the six populations of the species into two lineages. The variation within the populations ranged from two to six haplotypes per population. Nested clade analysis inferred allopatric fragmentation for three out of the five significant clades. The division of the lineages into two geographical units, the absence of gene flow and the allopatric fragmentation indicates long-term isolation, around 1.09-1.52 my ago. The isolation and fragmentation of the populations is postulated to be due to historical sea level fluctuations that occurred in Southern Africa during the Quaternary Period. Allopatric fragmentation and lack of gene flow among populations within the two major lineages are due to recent habitat destruction through development. The recognition that the species contains two evolutionarily significant units, corresponding to Agulhas and western lineages, will aid future conservation efforts to save this species.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.009
Threshold uncertainty score0.017

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.054
GPT teacher head0.352
Teacher spread0.298 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2005
Admission routes1
Has abstractyes

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