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Record W2725361041 · doi:10.1093/cid/cix392

Cancer-Attributable Mortality Among People With Treated Human Immunodeficiency Virus Infection in North America

2017· article· en· W2725361041 on OpenAlexafffund
Eric A. Engels, Elizabeth L. Yanik, Willian Wheeler, M. John Gill, Meredith S. Shiels, Robert Dubrow, Keri N. Althoff, Michael J. Silverberg, John T. Brooks, Mari M. Kitahata, James J. Goedert, Surbhi Grover, Ángel M. Mayor, Lesley S. Park, Anita Rachlis, Keith Sigel, Timothy R. Sterling, Jennifer E. Thorne, Ruth M. Pfeiffer, Constance A. Benson, Ronald J. Bosch, Gregory D. Kirk, Stephen Boswell, Kenneth H. Mayer, Chris Grasso, Robert S. Hogg, P. Richard Harrigan, Julio Montaner, Benita Yip, Julia Zhu, Kate Salters, Karyn Gabler, Kate Buchacz, Kelly A. Gebo, John T. Carey, Benigno Rodríguez, Michael A. Horberg, Charles S. Rabkin, Lisa P. Jacobson, Gypsyamber DʼSouza, Marina B. Klein, Sean B. Rourke, Jason Globerman, Madison Kopansky-Giles, Robert F. Hunter-Mellado, Steven G. Deeks, Jeffrey N. Martin, Pragna Patel, Michael S. Saag, Michael J. Mugavero, James H. Willig, Joseph J. Eron, Sonia Napravnik, Daniel R. Drozd, David W. Haas, Peter F. Rebeiro, Megan Turner, Sally Bebawy, Ben Rogers, Amy C. Justice, David A. Fiellin, Kathryn Anastos, Rosemary G. McKaig, Carol Lent, Stephen E. Van Rompaey, Justin McReynolds, William B. Lober, Stephen J. Gange, Alison G. Abraham, Bryan Lau, Jinbing Zhang, Jerry Jing, Sharada P. Modur, Cherise Wong, Brenna Hogan, Fidel Desir, Bin Liu, Bin You

Bibliographic record

VenueClinical Infectious Diseases · 2017
Typearticle
Languageen
FieldMedicine
TopicViral-associated cancers and disorders
Canadian institutionsHealth Sciences CentreSunnybrook Health Science CentreUniversity of Calgary
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Institute of Allergy and Infectious DiseasesNational Institute on AgingNational Eye InstituteNational Institute of Mental HealthNational Cancer InstituteNational Institute on Alcohol Abuse and AlcoholismNational Center for Advancing Translational SciencesHealth Resources and Services AdministrationCanadian Institutes of Health ResearchNational Institute on Drug AbuseNational Institute on Minority Health and Health DisparitiesNational Center for Research ResourcesCenters for Disease Control and PreventionNational Institutes of HealthCanadian HIV Trials Network, Canadian Institutes of Health Research
KeywordsHuman immunodeficiency virus (HIV)Antiretroviral therapyPublic healthMedicineCancerMortality rateVirusImmunologyVirologyEnvironmental healthViral loadInternal medicinePathology

Abstract

fetched live from OpenAlex

BACKGROUND: Cancer remains an important cause of morbidity and mortality in people with human immunodeficiency virus (PWHIV) on effective antiretroviral therapy (ART). Estimates of cancer-attributable mortality can inform public health efforts. METHODS: We evaluated 46956 PWHIV receiving ART in North American HIV cohorts (1995-2009). Using information on incident cancers and deaths, we calculated population-attributable fractions (PAFs), estimating the proportion of deaths due to cancer. Calculations were based on proportional hazards models adjusted for age, sex, race, HIV risk group, calendar year, cohort, CD4 count, and viral load. RESULTS: There were 1997 incident cancers and 8956 deaths during 267145 person-years of follow-up, and 11.9% of decedents had a prior cancer. An estimated 9.8% of deaths were attributable to cancer (cancer-attributable mortality rate 327 per 100000 person-years). PAFs were 2.6% for AIDS-defining cancers (ADCs, including non-Hodgkin lymphoma, 2.0% of deaths) and 7.1% for non-AIDS-defining cancers (NADCs: lung cancer, 2.3%; liver cancer, 0.9%). PAFs for NADCs were higher in males and increased strongly with age, reaching 12.5% in PWHIV aged 55+ years. Mortality rates attributable to ADCs and NADCs were highest for PWHIV with CD4 counts <100 cells/mm3. PAFs for NADCs increased during 1995-2009, reaching 10.1% in 2006-2009. CONCLUSIONS: Approximately 10% of deaths in PWHIV prescribed ART during 1995-2009 were attributable to cancer, but this fraction increased over time. A large proportion of cancer-attributable deaths were associated with non-Hodgkin lymphoma, lung cancer, and liver cancer. Deaths due to NADCs will likely grow in importance as AIDS mortality declines and PWHIV age.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.110
Threshold uncertainty score0.891

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.035
GPT teacher head0.371
Teacher spread0.336 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations89
Published2017
Admission routes2
Has abstractyes

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