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Record W2754753369

Enhancing the efficiency of human pancreatic islet dissociation

2017· article· en· W2754753369 on OpenAlexaffvenue
Jia Lu, Yang Yu, Mark Ungrin

Bibliographic record

VenueJournal of undergraduate research in Alberta · 2017
Typearticle
Languageen
FieldMedicine
TopicPancreatic function and diabetes
Canadian institutionsUniversity of CalgaryMcMaster University
Fundersnot available
KeywordsIsletTransplantationPancreatic isletsChemistryViability assayCellBiologyBiochemistryMedicineInternal medicineDiabetes mellitusEndocrinology
DOInot available

Abstract

fetched live from OpenAlex

Over half a million children worldwide are affected by type 1 diabetes, an autoimmune disease characterized by the destruction of insulin-producing pancreatic beta cells. Islet transplantation is a treatment that is currently limited by the lack of vascular network to support large islets post-transplantation. A promising proposal is to disperse native islets into single-cell suspensions and re-aggregate them into smaller, uniform “pseudo-islets”. Substantial cell loss during islet dispersion, however, remains an important obstacle that limits the yield of pseudo-islet aggregates, especially considering the scarcity of donor islets. To optimize the dissociation protocol, we experimented with different cell dissociation reagents, concentrations, and times in order to establish standards for future pseudo-islet formation procedure. Isolated human islets were dissociated using Trypsin, TrypLE, Accutase, Accumax, and Dispase. These dissociation reagents were identified through literature and the concentrations as well as dissociation times used were in ranges previously outlined. Cell counts of viable cells were recorded using Trypan Blue and PicoGreen DNA assay to quantify cell loss during islet dispersion, filtration and post-culture. Assessment of the viability of the re-aggregated pseudo-islets post-culture was performed using the Alamar Blue assay. Preliminary results showed the potential for 5.8-fold increase in cell recovery which provides evidence of the significant need to optimize the dissociation protocol. TrypLE showed the highest recovery of cells both post-dissociation and filtration. Results from the project are promising and further investigations will allow the results to become applicable to clinical trials. Improving the recovery and quality of dissociated islet cells will directly help increase the number of treatable patients from the limited supply of donor islets.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.006
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.200
Threshold uncertainty score0.681

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0030.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.066
GPT teacher head0.396
Teacher spread0.330 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2017
Admission routes2
Has abstractyes

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