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Record W2756844977

Resistance to extended-spectrum cephalosporins in Enterobacteriaceae from chickens, dogs, and pigs in Ontario

2017· dissertation· en· W2756844977 on OpenAlexaboutno aff
Pauline Lu Ching Zhang

Bibliographic record

VenueThe Atrium (University of Guelph) · 2017
Typedissertation
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAntibiotic Resistance in Bacteria
Canadian institutionsnot available
Fundersnot available
KeywordsCephalosporinEnterobacteriaceaeMicrobiologyVeterinary medicineBiologyMedicineAntibioticsEscherichia coliGeneticsGene
DOInot available

Abstract

fetched live from OpenAlex

Little information is available on resistance to extended-spectrum cephalosporins (ESCs) in Enterobacteriaceae from animals in Canada. The study objectives were to determine the frequency of ESC resistance in clinical, cecal, and fecal isolates of Enterobacteriaceae from chickens, dogs, and pigs in Ontario using selective and non-selective methods, and characterize the ESC resistance genes. All isolates were tested for ESC susceptibility and resistant ones were screened for major ESC resistance gene families. Most ESC-resistant isolates were E. coli and blaCMY was the most frequent gene family followed by blaCTX-M for all three animal species. There were high frequencies of intestinal carriage of ESC-resistant Enterobacteriaceae in all three animal species. Whole-genome sequencing of canine and swine CTX-M-positive isolates identified a diversity of sequence types, including human pandemic clones. The blaCTX-M variants found in this study provide evidence supporting horizontal gene transfer of ESC-resistant bacteria and their genes between humans and these animals.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.853
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.009
GPT teacher head0.217
Teacher spread0.209 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2017
Admission routes1
Has abstractyes

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