MétaCan
Menu
Back to cohort
Record W2761343791 · doi:10.24870/cjb.2017-a129

Wnt and inflammatory pathway mediated differential expression of water channel protein in glaucomatous trabecular meshwork

2017· article· en· W2761343791 on OpenAlexvenueno aff
Shaika Shanbagh, Rajesh Sasikumar, Sushma Tejwani, V.G Abilash, Arkasubhra Ghosh

Bibliographic record

VenueCanadian Journal of Biotechnology · 2017
Typearticle
Languageen
FieldMedicine
TopicGlaucoma and retinal disorders
Canadian institutionsnot available
Fundersnot available
KeywordsTrabecular meshworkWnt signaling pathwayProtein expressionCell biologyDifferential (mechanical device)GlaucomaChemistryBiologySignal transductionNeurosciencePhysicsBiochemistryGene

Abstract

fetched live from OpenAlex

Aquaporin (AQP) is an integral membrane protein which helps in the transport of water and small solutes [1]. The functions of AQP0 and AQP6 have not been studied in Glaucomatous trabecular meshwork. Intra-ocular Pressure (IOP) is regulated by Wnt signaling but till date no report has been published in patient trabecular meshwork tissue [2]. Effect of GSK3β (a Wnt signaling regulator) on IFNβ, an important immune-modulatory cytokine, has not been studied in Glaucoma. This study explores the cross talk between Wnt signaling and inflammatory pathway in context of water channel proteins' expression. Trabecular meshwork tissue after glaucoma surgery was collected with prior approval of the Institutional Ethics Committee and written informed consent. AXIN2, IFNβ, IL6, AQP0, AQP6 and AQP9 gene expression analysis was done in trabecular meshwork tissue from glaucoma filtration surgery patients (n=32) and cadaveric controls (n=20). Human Trabecular Meshwork (HTM) cells, cultured in DMEM with 10% FBS and 1% PSA were treated with Wnt activator (AZD2858; GSK3β inhibitor) or inhibitor (XAV939; β-catenin inhibitor) and analysed after 24 hrs for expression of the same genes. In patient TM samples, we observed a downregulation of AQP0, AQP9 (p=0.002) and significant gain in AQP6 (p≤0.03) and IL6 (p≤0.04) associated with increased Axin2 (p=0.04) and reduced IFNβ (0.01) when compared to controls. Activation of Wnt pathway (using chemical activator AZD2858) in HTM culture mimics the patient data demonstrating a reduction in AQP0, AQP9 and IFNβ expression, but significantly induced Axin2, AQP6 and IL6. Wnt inhibitor XAV939 reversed the same observations. This is the first study that illustrates the role for water channel proteins expression such as AQP0, AQP6 and AQP9 in glaucomatous trabecular meshwork. An inverse correlation was observed between expression of AXIN2 (Up-regulated) and IFNβ (down-regulated) in Glaucomatous trabecular meshwork and HTM cells which may be associated with inhibition of GSK3β. The data reveals interaction between Wnt and IFNβ as a possible mechanism that regulates expression of critical AQPs i.e. AQP 0, 6 and 9 with subsequent loss of hydrostatic and osmotic balance in glaucoma. Our observations suggest feasible role of Wnt inhibitors as therapy for glaucoma.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.096
Threshold uncertainty score0.359

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.006
GPT teacher head0.200
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

Explore more

Same venueCanadian Journal of BiotechnologySame topicGlaucoma and retinal disordersFrench-language works237,207