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Record W2761430010 · doi:10.3390/mol2net-03-04611

<strong>A Simple Method to </strong><strong>Classification</strong> <strong>α-Amylase and α-Glucosidase Inhibitors</strong><strong> Using </strong><strong>LDA and Decision Trees</strong>

2017· article· pl· W2761430010 on OpenAlexaff
Karel Diéguez‐Santana, Oscar Rivera-Borroto, Amilkar Puris Cáceres, Gerardo M. Casañola‐Martín

Bibliographic record

Venuenot available
Typearticle
Languagepl
FieldMedicine
TopicNatural Antidiabetic Agents Studies
Canadian institutionsCarleton University
Fundersnot available
KeywordsAlpha-amylaseAlpha (finance)Test setTraining setAlpha-glucosidaseChemistryArtificial intelligenceAmylaseMachine learningMathematicsEnzymeComputer scienceBiochemistryStatistics

Abstract

fetched live from OpenAlex

In this report are used two datasets involving the main antidiabetic enzymes targets α-amylase and α-glucosidase. The prediction of α-amylase and α -glucosidase inhibitory activity as Antidiabetic Agents is carried out using LDA and classification trees (CT). A large data set of 640 compounds for α-amylase and 1546 compounds in the case of α-glucosidase are selected to develop the tree model. In the case of CT-J48 have the better classification model performances for both targets with values above 80- 90% for the training and prediction sets, correspondingly. The best model shows an accuracy higher than 95% for training set; the model was also validated using 10-fold cross-validation procedure and through a test set achieving accuracies values of 85.32% and 86.80%, correspondingly. The main descriptors that influence the inhibitory activity of the antidiabetic enzymes are interpreted. Additionally, the obtained model is compared with other approaches previously published in the international literature showing better or goodness results. Finally, we can say that, the present results provided a double target approach for increasing the estimation of antidiabetic chemicals identification aimed by double-way workflow in virtual screenings pipelines

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.020
metaresearch head score (Gemma)0.013
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Meta-epidemiology (narrow), Meta-epidemiology (broad), Bibliometrics, Science and technology studies, Scholarly communication, Open science, Research integrity, Insufficient payload (model declined to judge)
Consensus categoriesMeta-epidemiology (narrow), Meta-epidemiology (broad), Science and technology studies, Scholarly communication, Open science, Research integrity, Insufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.342
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0200.013
Meta-epidemiology (narrow)0.0280.028
Meta-epidemiology (broad)0.0290.011
Bibliometrics0.0120.012
Science and technology studies0.0210.017
Scholarly communication0.0120.016
Open science0.0200.020
Research integrity0.0140.018
Insufficient payload (model declined to judge)0.0120.008

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.349
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2017
Admission routes1
Has abstractyes

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