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Record W2761430010 · doi:10.3390/mol2net-03-04611

<strong>A Simple Method to </strong><strong>Classification</strong> <strong>α-Amylase and α-Glucosidase Inhibitors</strong><strong> Using </strong><strong>LDA and Decision Trees</strong>

2017· article· pl· W2761430010 on OpenAlexaff
Karel Diéguez‐Santana, Oscar Rivera-Borroto, Amilkar Puris Cáceres, Gerardo M. Casañola‐Martín

Bibliographic record

Venuenot available
Typearticle
Languagepl
FieldMedicine
TopicNatural Antidiabetic Agents Studies
Canadian institutionsCarleton University
Fundersnot available
KeywordsAlpha-amylaseAlpha (finance)Test setTraining setAlpha-glucosidaseChemistryArtificial intelligenceAmylaseMachine learningMathematicsEnzymeComputer scienceBiochemistryStatistics

Abstract

fetched live from OpenAlex

In this report are used two datasets involving the main antidiabetic enzymes targets α-amylase and α-glucosidase. The prediction of α-amylase and α -glucosidase inhibitory activity as Antidiabetic Agents is carried out using LDA and classification trees (CT). A large data set of 640 compounds for α-amylase and 1546 compounds in the case of α-glucosidase are selected to develop the tree model. In the case of CT-J48 have the better classification model performances for both targets with values above 80- 90% for the training and prediction sets, correspondingly. The best model shows an accuracy higher than 95% for training set; the model was also validated using 10-fold cross-validation procedure and through a test set achieving accuracies values of 85.32% and 86.80%, correspondingly. The main descriptors that influence the inhibitory activity of the antidiabetic enzymes are interpreted. Additionally, the obtained model is compared with other approaches previously published in the international literature showing better or goodness results. Finally, we can say that, the present results provided a double target approach for increasing the estimation of antidiabetic chemicals identification aimed by double-way workflow in virtual screenings pipelines

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.002
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.039
Threshold uncertainty score0.131

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0020.006
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0020.002
Science and technology studies0.0010.001
Scholarly communication0.0020.002
Open science0.0010.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0390.037

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.064
GPT teacher head0.349
Teacher spread0.285 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2017
Admission routes1
Has abstractyes

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Same topicNatural Antidiabetic Agents StudiesFrench-language works237,207