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Record W2761573331 · doi:10.1111/pcmr.12653

The interaction between vitamin D receptor polymorphisms and sun exposure around time of diagnosis influences melanoma survival

2017· article· en· W2761573331 on OpenAlexafffund
Irene Orlow, Yang Shi, Peter A. Kanetsky, Nancy E. Thomas, Li Luo, Sergio Corrales‐Guerrero, Anne Ε. Cust, Lidia Sacchetto, Roberto Zanetti, Stefano Rosso, Bruce K. Armstrong, Terence Dwyer, Alison Venn, Richard P. Gallagher, Stephen B. Gruber, Loraine D. Marrett, Hoda Anton‐Culver, Klaus J. Busam, Colin B. Begg, Marianne Berwick

Bibliographic record

VenuePigment Cell & Melanoma Research · 2017
Typearticle
Languageen
FieldMedicine
TopicVitamin D Research Studies
Canadian institutionsCancer Care OntarioCanadian Centre for Applied Research in Cancer Control
FundersNational Cancer InstituteUniversity of North Carolina at Chapel HillMenzies Institute for Medical ResearchUniversity of SydneyUniversity of California, IrvineNational Institute of Environmental Health SciencesMemorial Sloan-Kettering Cancer CenterCancer Council NSWCancer Care OntarioUniversity of PennsylvaniaUniversity of TasmaniaUniversity of OxfordUniversity of Southern California
KeywordsTaqICalcitriol receptorMelanomaSNPHaplotypeMedicineVitamin D and neurologyInternal medicineOncologySunburnCancer researchGenotypeSingle-nucleotide polymorphismPolymorphism (computer science)BiologyGeneticsGeneDermatology

Abstract

fetched live from OpenAlex

Evidence on the relationship between the vitamin D pathway and outcomes in melanoma is growing, although it is not always clear. We investigated the impact of measured levels of sun exposure at diagnosis on associations of vitamin D receptor gene (VDR) polymorphisms and melanoma death in 3336 incident primary melanoma cases. Interactions between six SNPs and a common 3'-end haplotype were significant (p < .05). These SNPs, and a haplotype, had a statistically significant association with survival among subjects exposed to high UVB in multivariable regression models and exerted their effect in the opposite direction among those with low UVB. SNPs rs1544410/BsmI and rs731236/TaqI remained significant after adjustment for multiple testing. These results suggest that the association between VDR and melanoma-specific survival is modified by sun exposure around diagnosis, and require validation in an independent study. Whether the observed effects are dependent or independent of vitamin D activation remains to be determined.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.004
metaresearch head score (Gemma)0.002
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScience and technology studies
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.046
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0040.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0020.002
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.066
GPT teacher head0.368
Teacher spread0.302 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations17
Published2017
Admission routes2
Has abstractyes

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Same venuePigment Cell & Melanoma ResearchSame topicVitamin D Research StudiesFrench-language works237,207