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Record W2762102374 · doi:10.24870/cjb.2017-a181

Marker Assisted Introgression of drought tolerance QTLs into popular high yielding varieties of rice

2017· article· en· W2762102374 on OpenAlexvenueno aff
B.N.Gyanadeep Jeevula, G.R. Eswar, K. Gopalakrishna, B.N. Swarajyalakshmi, E.N. Suresh, B.R. Yamini, M.M. Bharghavi, Lakshminarayana R. Vemireddy

Bibliographic record

VenueCanadian Journal of Biotechnology · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicRice Cultivation and Yield Improvement
Canadian institutionsnot available
Fundersnot available
KeywordsIntrogressionDrought toleranceBiologyQuantitative trait locusAgronomyGeneticsGene

Abstract

fetched live from OpenAlex

Rice is the major staple cereal of India cultivated in about 44 million hectares area. In recent years, the increased occurrence and severity of drought stress has led to a yield decline in rice. This calls for development of varieties with higher yield potential combining drought tolerance. Even though many QTLs have been identified for various drought-related traits in rice; there are only few efforts to introgress them to develop improved breeding lines. Hence, the present research work aimed to transfer three QTL regions viz. qDTY1.1, qDTY2.2 and qDTY4.1 from Drt1IR-64 through marker-assisted breeding with the strategy of improving the grain yield of popular high yielding varieties of rice (MTU1010 and NLR34449) under reproductive stage drought stress. The parents (Drt1IR64, MTU1010 and NLR34449) were screened with flanking markers of the targeted QTLs. Among all, RM551 (qDTY4.1) showed clear polymorphism between drought tolerant (DrtIR64) and susceptible lines (MTU1010 and NLR34449).The flanking markers of qDTY2.2 (RM555, RM279 and RM492) showed polymorphism of DrtIR64 with MTU1010 and NLR34449.Using these polymorphic markers as foreground markers, the BC 1 F 1 plants obtained from MTU1010/DrtIR64 (Donor for qDTY1.1, qDTY2.2 and qDTY4.1) and NLR34449/DrtIR64 were confirmed for the presence of the targeted genes. Later, the confirmed BC 1 F 1 plants of two crosses will be backcrossed with recipient parents. Screening of the parents is being carried out at molecular level employing SSR markers that spanned the total genome, for identification of polymorphic markers. These will be used as background markers to test the recovery of recurrent genome content in the BC 2 F 2 progeny.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.564
Threshold uncertainty score0.996

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.227
Teacher spread0.210 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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