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Record W2762786414 · doi:10.24870/cjb.2017-a175

DNA barcoding of endangered medicinal plant Cayratia pedata

2017· article· en· W2762786414 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueCanadian Journal of Biotechnology · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicEthnobotanical and Medicinal Plants Studies
Canadian institutionsnot available
Fundersnot available
KeywordsDNA barcodingEndangered speciesBiologyEvolutionary biologyEcology

Abstract

fetched live from OpenAlex

Acknowledging the effectiveness of plants and their products in the treatment of diseases, the WHO recognizes that medicinal plants play an important role in the low-cost primary healthcare of about 80% of world's population in developing countries including India. Plant and other natural products are gaining popularity as an alternative and system of medicine all over the world. Cayratia pedata is an indigenous endangered medicinal herb of south India belonging to the family Vitaceae. Traditionally, the leaves of this plant have been used as a dietary ingredient in the treatment of ulcers and diarrhoea. In Ayurveda the extract from Cayratia pedata is used to prepare formulations prescribed to treat microbial infections, ulcers, inflammations and arthritis. We have identified this plant to be a good source of phytochemicals like alkaloids, tannins, phenolic compounds, flavonoids and terpenoids. Correct identification of any medicinal plant is an absolute requirement in order to avoid errors in collection of the plants used for the formulations whose effectiveness depends on the natural products contained in them. DNA barcoding is a reliable tool in scientifically identifying medicinal plants. The current study explains how DNA barcode analysis of the plant Cayratia pedata helps in the proper identification based on nucleotide diversity of short DNA segments. DNA from the leaves of the plant was extracted and the chloroplast gene rbcL was amplified by PCR and sequenced. The sequence was subjected to a BLAST analysis to compare it with that of other species and a phylogenetic tree was constructed. The results confirmed that the plant belonged to the family Vitaceae. DNA bar-code analysis is a powerful technique for the identification, vouching and registration of medicinal plants especially when there is high species diversity. This helps in collecting the precise species that has the maximum yield of the active principles needed by the unskilled user as well as the pharmaceutical industry.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.371
Threshold uncertainty score0.997

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.247
Teacher spread0.200 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it