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Record W2764031274 · doi:10.24870/cjb.2017-a173

Towards enhancement of yield by molecular stacking of yield contributing genes in rice (Oryza sativa L.)

2017· article· en· W2764031274 on OpenAlexvenueno aff
B.R. Yamini, M.M. Bharghavi, G.R. Eswar, K. Gopalakrishna, B.N. Jeevula, B.N. Swarajyalakshmi, E.N. Suresh, Kodali Hariprasad, Lakshminarayana R. Vemireddy

Bibliographic record

VenueCanadian Journal of Biotechnology · 2017
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic Mapping and Diversity in Plants and Animals
Canadian institutionsnot available
Fundersnot available
KeywordsOryza sativaYield (engineering)StackingAgronomyGeneBiologyChemistryMaterials scienceGeneticsComposite material

Abstract

fetched live from OpenAlex

Rice (Oryza sativa L.) is a staple food for over half of the global population. Rice yield is mainly determined by three complex traits i.e., number of panicles per plant, number of grains per panicle and grain weight which are governed by many genes with minute effect called quantitative trait loci (QTL). As of now, more than 30 QTLs governing yield and its component traits have been cloned and molecularly characterized. Stacking of harmonious QTLs/genes into a single elite variety proved to show higher yields. To this end, in the present study, two strategies have been contemplated to raise the yield ceiling in rice. In the first strategy, the validated known yield genes would be pyramided into a single elite variety by marker-assisted backcross breeding. For this, the validation of majority of the yield gene-specific markers from known high yielding varieties has been completed. In all, 17 markers showed polymorphism with the recurrent parent MTU1010. Using these polymorphic markers as foreground markers, the BC1F1 plants obtained from MTU1010/MTU3626 (Donor for DEP1, GW5 and GW8) and MTU1010/Swarna (Donor for GS5 and qSS7) were confirmed for the presence of the yield genes. Later, the confirmed BC1F1 plants will be intercrossed to pyramid the yield genes. In the second strategy, the candidate genes for the yield component traits would be mapped and then pyramided into a single elite variety. To this end, the rice varieties MTU3626 and NLR33892 have been chosen as donors for grain weight and grain number, respectively and BPT5204, a fine grain variety has been chosen as recurrent variety. The F2 populations of the crosses BPT5204/ MTU3626 and BPT5204/NLR33892 are being grown in the field. The DNA from 20 plants with extreme phenotype for the targeted traits would be bulk sequenced along with the parents for rapid detection of QTLs using QTL-seq method. Later, the major QTLs would be introgressed into BPT5204 and evaluated for its yield enhancement.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.006
Threshold uncertainty score0.614

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.232
Teacher spread0.217 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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