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A‐Kinase Anchoring Proteins Coordinate the Contractile Phenotype of Airway Smooth Muscle

2016· article· en· W2766485711 on OpenAlexaff
W. J. Poppinga, Bing Han, Carolina R.S. Elzinga, Andrew J. Halayko, Herman Meurs, Martina Schmidt

Bibliographic record

VenueThe FASEB Journal · 2016
Typearticle
Languageen
FieldMedicine
TopicNeonatal Respiratory Health Research
Canadian institutionsUniversity of Manitoba
Fundersnot available
KeywordsCalponinCycloheximideCell biologyActinBiologyMessenger RNAProtein kinase CProtein kinase AScaffold proteinProtein biosynthesisKinaseMolecular biologySignal transductionBiochemistry

Abstract

fetched live from OpenAlex

Smooth muscle contraction is modulated by three pathways: the amount of free [Ca 2+ ] i ; Ca 2+ sensitivity; and, the regulation of intracellular filaments comprising the contractile machinery. Recently, a new dimension has emerged to play a role in airway smooth muscle function, namely the scaffolding protein family A‐kinase anchoring proteins (AKAPs) that bind cAMP effector PKA and other proteins to specific cellular compartments. Here we studied the role of AKAPs in maintaining the contractile phenotype of the airway smooth muscle. Treatment with AKAP‐PKA interaction inhibitor st‐Ht31 (50 μM) for 96 h caused an increase in abundance of the contractile proteins α‐smooth muscle actin (αSMA) (283% of basal) and calponin (159% of basal) in immortalized human tracheal smooth muscle cells, without an increase in mRNA expression or stability. To understand potential underlying mechanisms for this response, after 72 h incubation with st‐Ht31, we treated cells (24 h) with the mRNA transcription inhibitor, actinomycin D (1 μg/mL): this decreased abundance of both proteins in absence and presence of st‐Ht31 (~50 αSMA, ~70% calponin). Nonetheless, st‐Ht31 still induced higher protein levels compared to untreated control cultures (~35% αSMA, ~80% calponin). Inhibition of protein synthesis using cycloheximide (5 μg/mL) had no effect on the expression αSMA, however it did increase the expression of calponin under both control and st‐Ht31‐treatment conditions (~200%), suggesting that αSMA is a rather stable protein and that calponin degradation requires de novo synthesis of an unknown protein. Lysosomal inhibition using chloroquine (50 μM) did not affect either protein. Inhibition of the proteasome with MG‐132 (5 μM) reversed st‐Ht31‐induced increase of αSMA (102% of basal), without affecting the st‐Ht31 induced increase of calponin (210% of basal), revealing that st‐Ht31‐induced increase in αSMA requires proteasomal degradation of an unknown protein. Functionally, incubation of human tracheal smooth muscle strips with st‐Ht31 for 96 h increased both the abundance of contractile proteins and the contractile response to methacholine. These data implicate that AKAPs regulate the maintenance of contractile smooth muscle, probably by post‐translationally controlling levels of contractile proteins. Support or Funding Information This study was supported by the Dutch Lung Foundation (Grant #: 3.2.11.015) and an Ubbo Emmius grant.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.040
GPT teacher head0.328
Teacher spread0.288 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2016
Admission routes1
Has abstractyes

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