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Record W2766884206 · doi:10.1073/pnas.1708984114

Mapping local and global variability in plant trait distributions

2017· article· en· W2766884206 on OpenAlexaff
Ethan E. Butler, Abhirup Datta, Habacuc Flores‐Moreno, Ming Chen, Kirk R. Wythers, Farideh Fazayeli, Arindam Banerjee, Owen K. Atkin, Jens Kattge, Bernard Amiaud, Benjamin Blonder, Gerhard Boenisch, Ben Bond‐Lamberty, Kerry A. Brown, Chaeho Byun, Giandiego Campetella, Bruno Enrico Leone Cerabolini, Johannes H. C. Cornelissen, Joseph M. Craine, Dylan Craven, Franciska T. de Vries, Sandra Díaz, Tomas F. Domingues, Estelle Forey, Andrés González‐Melo, Nicolas Gross, Wenxuan Han, Wesley Hattingh, Thomas Hickler, Steven Jansen, K. Krämer, Nathan J. B. Kraft, Hiroko Kurokawa, Daniel C. Laughlin, Patrick Meir, Vanessa Minden, Ülo Niinemets, Josep Peñuelas, Quentin D. Read, Lawren Sack, Brandon Schamp, Nadejda A. Soudzilovskaia, Marko J. Spasojevic, Ênio Sosinski, Peter Thornton, Fernando Valladares, Peter M. van Bodegom, Mathew Williams, Christian Wirth, Peter B. Reich

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2017
Typearticle
Languageen
FieldEnvironmental Science
TopicRemote Sensing in Agriculture
Canadian institutionsAlgoma University
FundersWageningen University and ResearchU.S. Department of EnergyInstitute on the Environment, University of MinnesotaOffice of ScienceResearch Councils UKDeutsches Zentrum für integrative Biodiversitätsforschung Halle-Jena-LeipzigBiological and Environmental ResearchNational Natural Science Foundation of ChinaSight Research UKChinese Academy of SciencesAustralian Research CouncilCentre of Excellence for Environmental Decisions, Australian Research CouncilNatural Environment Research CouncilUniversity of Minnesota
KeywordsTraitBayesian probabilityGridRange (aeronautics)Specific leaf areaEnvironmental scienceEcologyBiologyComputer scienceStatisticsGeographyMathematicsPhotosynthesisBotany

Abstract

fetched live from OpenAlex

Our ability to understand and predict the response of ecosystems to a changing environment depends on quantifying vegetation functional diversity. However, representing this diversity at the global scale is challenging. Typically, in Earth system models, characterization of plant diversity has been limited to grouping related species into plant functional types (PFTs), with all trait variation in a PFT collapsed into a single mean value that is applied globally. Using the largest global plant trait database and state of the art Bayesian modeling, we created fine-grained global maps of plant trait distributions that can be applied to Earth system models. Focusing on a set of plant traits closely coupled to photosynthesis and foliar respiration-specific leaf area (SLA) and dry mass-based concentrations of leaf nitrogen ([Formula: see text]) and phosphorus ([Formula: see text]), we characterize how traits vary within and among over 50,000 [Formula: see text]-km cells across the entire vegetated land surface. We do this in several ways-without defining the PFT of each grid cell and using 4 or 14 PFTs; each model's predictions are evaluated against out-of-sample data. This endeavor advances prior trait mapping by generating global maps that preserve variability across scales by using modern Bayesian spatial statistical modeling in combination with a database over three times larger than that in previous analyses. Our maps reveal that the most diverse grid cells possess trait variability close to the range of global PFT means.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.001
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.269
Teacher spread0.245 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations294
Published2017
Admission routes1
Has abstractyes

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Same venueProceedings of the National Academy of SciencesSame topicRemote Sensing in AgricultureFrench-language works237,207