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Record W2770508379 · doi:10.7287/peerj.preprints.3159

Excuse me, do you have a moment to talk about version control?

2017· article· en· W2770508379 on OpenAlexaff
Jennifer Bryan

Bibliographic record

Venuenot available
Typearticle
Languageen
FieldComputer Science
TopicData Analysis with R
Canadian institutionsUniversity of British Columbia
Fundersnot available
KeywordsExcuseMoment (physics)Political scienceLawPhysics

Abstract

fetched live from OpenAlex

Data analysis, statistical research, and teaching statistics have at least one thing in common: these activities all produce many files! There are data files, source code, figures, tables, prepared reports, and much more. Most of these files evolve over the course of a project and often need to be shared with others, for reading or edits, as a project unfolds. Without explicit and structured management, project organization can easily descend into chaos, taking time away from the primary work and reducing the quality of the final product. This unhappy result can be avoided by repurposing tools and workflows from the software development world, namely, distributed version control. This article describes the use of the version control system Git and and the hosting site GitHub for statistical and data scientific workflows. Special attention is given to projects that use the statistical language R and, optionally, R Markdown documents. Supplementary materials include an annotated set of links to step-by-step tutorials, real world examples, and other useful learning resources.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.016
metaresearch head score (Gemma)0.180
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.172
Threshold uncertainty score0.575

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0160.180
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.005
Science and technology studies0.0010.003
Scholarly communication0.0040.008
Open science0.0020.004
Research integrity0.0030.007
Insufficient payload (model declined to judge)0.1720.190

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.266
Teacher spread0.253 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2017
Admission routes1
Has abstractyes

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