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Research priorities for the discovery of a cure for chronic hepatitis B: Report of a workshop

2017· article· en· W2774265441 on OpenAlexaff
Timothy M. Block, Harvey J. Alter, Nathaniel Brown, Alan P. Brownstein, Carol Brosgart, Kyong‐Mi Chang, Pei‐Jer Chen, Chari Cohen, Hashem B. El‐Serag, Jordan J. Feld, Robert G. Gish, Jeffrey S. Glenn, Tim F. Greten, Juo-Tao Guo, Yujin Hoshida, Kris V. Kowdley, Wenhui Li, Anna S. Lok, Brian J. McMahon, Anand S. Mehta, Robert Perrillo, Charles M. Rice, JoAnn Rinaudo, Raymond F. Schinazi, Kirti Shetty

Bibliographic record

VenueAntiviral Research · 2017
Typearticle
Languageen
FieldMedicine
TopicHepatitis B Virus Studies
Canadian institutionsToronto General Hospital
FundersNational Institute of Allergy and Infectious DiseasesNational Cancer InstituteNational Institutes of Health
KeywordsChronic hepatitisHepatologyMedicineViral hepatitisSelection (genetic algorithm)Hepatitis BFamily medicineImmunologyInternal medicineComputer scienceVirus

Abstract

fetched live from OpenAlex

In early 2017, the Hepatitis B Foundation invited 30 experts in the fields of hepatitis B and liver cancer research to identify projects they deemed important to the goal of finding a cure for chronic hepatitis B and D and the diseases with which these viral infections are associated. They were also asked to identify general categories of research and to prioritize sub-project topics within those areas. The experts generally agreed on broadly defined areas of research, but there was usually little difference between the highest and lowest scoring projects; for the most part, all programs described in this document were considered valuable and necessary. An executive summary of this discussion was recently published (Alter et al., Hepatology 2017). The present manuscript reports the areas of research identified by the workshop participants, provides a brief rationale for their selection, and attempts to express differences among the priorities assigned to each area of research, when such distinctions were expressed.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.073
metaresearch head score (Gemma)0.041
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: none
Teacher disagreement score0.073
Threshold uncertainty score0.388

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0730.041
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0010.003
Bibliometrics0.0020.001
Science and technology studies0.0080.002
Scholarly communication0.0110.005
Open science0.0040.018
Research integrity0.0110.019
Insufficient payload (model declined to judge)0.0060.003

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.250
GPT teacher head0.516
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations33
Published2017
Admission routes1
Has abstractyes

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