MétaCan
Menu
Back to cohort
Record W2783379777 · doi:10.1073/pnas.1715564115

Human airway branch variation and chronic obstructive pulmonary disease

2018· article· en· W2783379777 on OpenAlexafffund
Benjamin M. Smith, Hussein Traboulsi, John H. M. Austin, Ani Manichaikul, Eric A. Hoffman, Eugene R. Bleecker, Wellington V. Cardoso, Christopher S. Cooper, David Couper, Stephen Dashnaw, Jia Guo, MeiLan K. Han, Nadia N. Hansel, Emlyn Hughes, David R. Jacobs, Richard E. Kanner, Joel D. Kaufman, Eric Kleerup, Ching‐Long Lin, Kiang Liu, Christian M. Lo Cascio, Fernando J. Martínez, Jennifer Nguyen, Martin R. Prince, Stephen Rennard, Stephen S. Rich, Leora Simon, Yanping Sun, Karol E. Watson, Prescott G. Woodruff, Carolyn J. Baglole, R. Graham Barr

Bibliographic record

VenueProceedings of the National Academy of Sciences · 2018
Typearticle
Languageen
FieldMedicine
TopicChronic Obstructive Pulmonary Disease (COPD) Research
Canadian institutionsMcGill University Health Centre
FundersNational Institute of Environmental Health SciencesNational Institute of Diabetes and Digestive and Kidney DiseasesFonds de Recherche du Québec - SantéNational Institutes of HealthGrifolsForest Research InstituteMcGill UniversityMcGill University Health CentreRegeneron PharmaceuticalsCOPD FoundationGlaxoSmithKlineIkariaNational Heart, Lung, and Blood InstituteNovartis Pharmaceuticals CorporationAstraZenecaChiesi FarmaceuticiSanofiFoundation for the National Institutes of Health
KeywordsCOPDAirwayMedicinePopulationPulmonary diseaseLungBiomarkerInternal medicineBiologyGeneticsAnesthesia

Abstract

fetched live from OpenAlex

Significance The human airway tree is a filter of noxious particulate matter, the primary cause of chronic obstructive pulmonary disease (COPD). We demonstrate that variation in central airway tree branching occurs in over one-quarter of the general population and increases COPD susceptibility, particularly among smokers. We show that these central airway branch variants are biomarkers of altered distal lung structure, the primary site of COPD pathobiology. Finally, we demonstrate the heritability of central airway branch variants within families and identify and replicate an association with FGF 10 . These findings suggest that central airway branch variants, easily detectable by computed tomography, represent heritable biomarkers of widely altered lung structure and a COPD susceptibility factor.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.011

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.327
Teacher spread0.297 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations128
Published2018
Admission routes2
Has abstractyes

Explore more

Same venueProceedings of the National Academy of SciencesSame topicChronic Obstructive Pulmonary Disease (COPD) ResearchFrench-language works237,207