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Record W2783814133 · doi:10.30699/mmlj17.1.2.68

Detection and Distribution of various HLAR Gene in Enterococcus faecalis and Enterococcus faecium by Multiplex-PCR

2018· article· en· W2783814133 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

venuePublished in a venue whose home country is Canada.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueModern Medical Laboratory Journal · 2018
Typearticle
Languageen
FieldMedicine
TopicAntimicrobial Resistance in Staphylococcus
Canadian institutionsnot available
Fundersnot available
KeywordsMicrobiologyEnterococcus faecalisBiologyMultiplex polymerase chain reactionEnterococcusGeneAntibioticsPolymerase chain reactionGeneticsEscherichia coli

Abstract

fetched live from OpenAlex

In recent years, three new aminoglycoside resistance genes such as aph (3)-IIIa and ant (4)-Ia, that encode for the APH (3) and ANT (4) have also been identified. The aim of this study was to come up with a multiplex-PCR procedure for detection of aac(6)-Ie-aph(2)-Ia, aph(3)-IIIa, ant(4)-Ia genes in the Enterococcus spp. clinical isolates. Material and Method: 100 samples were isolated from various specimens, from various hospitals in Tehran, Iran. The grown colonies were identified by standard biochemical and disc diffusion tests. Multiplex-PCR for aac (6')-Ie -aph(2'')-Ia , aph(3)-IIIa, ant(4)-Ia genes amplification were performed in order to confirm bacterial colonies as Enterococcus spp. Results: Eighty four (84%) Enterococcus spp. isolates were collected from the 100 specimens. The highest and lowest isolates were related to urine (48%) and sputum (2%). Antibiotic susceptibility test results showed that the highest and lowest resistance was related to tetracycline and nitrofurantoin, respectively. Multiplex PCR results revealed that aac (6)-Ie-aph (2)-Ia, ant (4)-Ia and aph (3)-IIIa genes were present in 6% of the isolated bacteria from the urine, 2% from the wound and 1% from the pleural samples. the aac (6)-Ie-aph (2)-Ia and aph (3)-IIIa genes were present in 25% of the isolated strains from the urine, 3% from the wound and 2% from the plural specimens. Nine percent of the strains were isolated from the urine, 3% from the wound and 1% from the plural were positive for aac (6)-Ie-aph (2)-Ia and ant (4)-Ia genes. Discussion: we had observed enterococci isolates with phenotypic resistance to HLAR and demonstrated aac(6)-Ie-aph(2)-Ia and aph(3)-IIIa genes more frequently occurring than other genes. A collection of AMEs are accountable for HLAR status among Enterococcus species. The aac (6)-Ie-aph (2)-Ia gene was detected more frequently than the other genes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.001
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.336
Threshold uncertainty score0.844

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.007
GPT teacher head0.250
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it