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Record W2785461554 · doi:10.2134/jeq2017.12.0477

Sources of Antibiotic Resistance Genes in a Rural River System

2018· article· en· W2785461554 on OpenAlexafffundabout
Mandy M. McConnell, Lisbeth Truelstrup Hansen, Kara D. Neudorf, Jenny L. Hayward, Rob Jamieson, Christopher K. Yost, Anthony Z. Tong

Bibliographic record

VenueJournal of Environmental Quality · 2018
Typearticle
Languageen
FieldEnvironmental Science
TopicPharmaceutical and Antibiotic Environmental Impacts
Canadian institutionsUniversity of ReginaAcadia UniversityDalhousie University
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsWatershedWastewaterFecal coliformAntibiotic resistanceSewage treatmentAntibioticsResistance (ecology)FecesEnvironmental scienceBiologyVeterinary medicineEcologyMicrobiologyEnvironmental engineeringWater qualityMedicine

Abstract

fetched live from OpenAlex

The increasing prevalence of antibiotic resistance genes (ARGs) in the environment is problematic due to the risk of horizontal gene transfer and development of antibiotic resistant pathogenic bacteria. Using a suite of monitoring tools, this study aimed to investigate the sources of ARGs in a rural river system in Nova Scotia, Canada. The monitoring program specifically focused on the relative contribution of ARGs from a single tertiary‐level wastewater treatment plant (WWTP) in comparison to contributions from the upgradient rural, sparsely developed, watershed. The overall gene concentration significantly ( p < 0.05) increased downstream from the WWTP, suggesting that tertiary‐level treatment still contributes ARGs to the environment. As a general trend, ARG concentrations upstream were found to decrease as proximity to human‐impacted areas decreased; however, many ARGs remained above detection limits in headwater river samples, which suggested their ubiquitous presence in this watershed in the absence of obvious pollution sources. Significant correlations with ARGs were found for HF183 human fecal marker, Escherichia coli, and some antibiotics, suggesting that these markers may be useful for prediction and understanding of ARG levels and sources in rural rivers. Core Ideas Tertiary wastewater treatment contributed antibiotic resistance genes (ARGs) to the river. ARG levels decreased as proximity to anthropogenic influence decreased. ARGs were observed at detectable levels even in undeveloped headwaters. High flow conditions correlated to high ARG loading in the river. Positive correlations were found between ARGs and fecal indicators.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.247
Threshold uncertainty score0.916

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.298
Teacher spread0.272 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations26
Published2018
Admission routes3
Has abstractyes

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