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Record W2785527231 · doi:10.1016/j.bbmt.2017.12.624

Resolution of CGD Related Colitis after Allogeneic Hematopoietic Stem Cell Transplantation in Patients with Chronic Granulomatous Disease—Early Results From the 6903 Study of the Primary Immune Deficiency Treatment Consortium (PIDTC)

2018· article· en· W2785527231 on OpenAlexaff
Jennifer W. Leiding, Brent R. Logan, Ziyan Yin, Erin Arbuckle, Jack Bleesing, Kathleen E. Sullivan, Jennifer Heimall, Lauri Burroughs, Suzanne Skoda‐Smith, Shanmuganathan Chandrakasan, Lolie C. Yu, Benjamin Oshrine, Geoff D.E. Cuvelier, Monica S. Thakar, Karin Chen, Shalini Shenoy, Blachy J. Dávila Saldaña, Katja G. Weinacht, Avni Y. Joshi, Farid Boulad, Troy C. Quigg, Christopher C. Dvorak, Alan P. Knutsen, Hey Chong, Holly Miller, M. Teresa de la Morena, Kenneth B. DeSantes, Morton J. Cowan, Luigi D. Notarangelo, Donald B. Kohn, Sung‐Yun Pai, Elizabeth Stenger, Jennifer M. Puck, Neena Kapoor, Michael A. Pulsipher, Élie Haddad, Linda M. Griffith, William T. Shearer, Harry L. Malech, Suhag Parikh, Rebecca Marsh, Elizabeth M. Kang

Bibliographic record

VenueBiology of Blood and Marrow Transplantation · 2018
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmunodeficiency and Autoimmune Disorders
Canadian institutionsUniversité de MontréalCentre Hospitalier Universitaire Sainte-JustineCancerCare Manitoba
Fundersnot available
KeywordsMedicineChronic granulomatous diseaseHematopoietic stem cell transplantationColitisInternal medicinePrimary immunodeficiencyInflammatory bowel diseaseTransplantationUlcerative colitisGastroenterologyImmunologyDisease

Abstract

fetched live from OpenAlex

Background: Phagocytes of patients with CGD have a deficient NADPH oxidase and respiratory burst, which limit production of reactive oxygen species. Allogeneic hematopoietic stem cell transplant (HSCT) offers a potential cure with resolution of life-threatening infections. Approximately 50% of CGD patients develop inflammatory bowel disease similar in pathology to Crohn's disease. CGD related colitis is often difficult to treat and increases disease associated morbidity. We sought to determine if CGD related colitis resolved after HSCT in CGD patients. Methods: Subjects were enrolled on PIDTC protocol 6903, a multi-center retrospective and prospective natural history study of patients treated for CGD since 1995. We evaluated survival, transplant strategy, and the incidence of colitis in CGD patients who received HSCT, at baseline and post-HSCT. The 2-year probability of survival among subjects with or without IBD at baseline was estimated by Kaplan-Meier analysis, and the groups were compared using the log-rank test. Results: 153 subjects underwent HSCT for treatment of CGD during 1/1/2005-6/31/2016 and had known baseline colitis. 53 (35%) had a history of colitis prior to HSCT, and, 17 out of 44 evaluable patients (34%) had disease that was not controlled with medications at the time of HSCT. Conditioning regimens included BuCy (27%), BuFlu (27%), Bu + TBI (19%), FluMel (13%), and others (13%). Of these, 32 (21%), 10 (7%), and 6 (4%) subjects received grafts from HLA-matched sibling donors, other HLA-matched related donors, or mismatched related donors, respectively, while 104 (68%) received grafts from unrelated donors. Graft sources included bone marrow (55%), peripheral blood stem cells (28%) or cord blood (17%). Most subjects (71%) received a calcineurin inhibitor for GVHD prophylaxis with or without 1 or more additional agent(s). The 2-year probability of overall survival of those with or without a history of colitis at baseline was 82% (95% CI 68-90%) vs. 87% (95% CI 78-92%); P = .77. Among the 153 subjects with a history of colitis at baseline and evaluated at 2 years post-HSCT, 90% had resolution of colitis, 5% still had colitis symptoms, and 5% had unknown colitis status. Conclusions: Allogeneic HSCT for CGD was associated with anoverall survival of > 80% at 2 years. For at least 90% of CGD patients with a history of colitis at baseline and evaluable at 2 years post-HSCT, resolution of colitis was observed, consistent with curative treatment for colitis related to CGD. Sponsored by: NIAID and ORDR, NCATS, NIH (U54-AI-082973).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.266
Threshold uncertainty score0.480

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.177
Teacher spread0.173 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2018
Admission routes1
Has abstractyes

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