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First report of downy mildew caused by <i>Peronospora chlorae</i> on lisianthus in Turkey

2018· article· en· W2785906437 on OpenAlexaboutno aff
Güliz Tepedelen Ağaner, Asude Ece Uysal

Bibliographic record

VenueNew Disease Reports · 2018
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Pathogens and Resistance
Canadian institutionsnot available
Fundersnot available
KeywordsDowny mildewSporangiumBiologyBotanyIntergenic regionCropHorticultureSporeAgronomy

Abstract

fetched live from OpenAlex

Lisianthus (Eustoma grandiflorum), also known as Texas bluebell, belongs to the family Gentianaceae. Lisianthus is a cut flower crop and is grown as an annual in İzmir, Turkey where greenhouse production exceeded 4 million plants produced from an area of 5.6 hectares in 2016 (Tüik, 1). In June 2017, plants showing severe downy mildew symptoms were observed in greenhouses in Menderes province. Under wet conditions, infected leaves turned yellow or pale green, with a greyish to brownish fungal-like downy growth developing on both the abaxial and adaxial leaf surface (Fig. 1). Leaf defoliation occurred at high disease severity and the remaining leaves withered. Infected leaves were collected for microscopic examination and morphological identification. A layer of sporangiophores was observed on symptomatic leaves, characteristic of a downy mildew. Sporangiophores were hyaline with long straight trunks and ended with two slightly curved branchlets. The sporangiophores were 200-480 × 4-11 μm. Sporangia were ovoid and hyaline, and measured 14-20 × 14-18 μm (Fig. 2). The pathogen was identified as Peronospora chlorae based on morphological characteristics (Hall, 2). DNA analysis was performed to confirm the identity of the pathogen. The internal transcribed spacer (ITS) region of rDNA was amplified and sequenced with primers ITS1 and ITS4 (White et al., 3) and the sequence was submitted to GenBank (Accession No. MG711454). A BLASTn analysis showed 100% identity to P. chlorae (KT271839), confirming the identity of the pathogen. For pathogenicity testing, infected leaves were collected and sporangia were washed from the diseased leaves with sterile water. Pathogenicity tests were performed by spraying lisianthus seedlings with the conidial suspension. Plants were then covered with plastic bags and incubated at 22-24°C with 90% relative humidity. Seven days post inoculation, sporangiophores were observed on infected lisianthus plants while no symptoms were observed on control plants. Peronospora chlorae has been previously reported from Denmark, France, Hungary, Italy, The Netherlands, Norway, Poland, Portugal, Spain, Switzerland, Ukraine, United Kingdom, the former Yugoslavia, Canada, Mexico, and China (Yang et al., 4). To our knowledge, this is the first report of P. chlorae causing downy mildew on lisianthus in Turkey.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0010.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.208
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations1
Published2018
Admission routes1
Has abstractyes

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