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Record W2789823241 · doi:10.1093/jcag/gwy008.297

A296 THE ANTI-COLITIC EFFECT OF INFECTION WITH HYMENOLEPIS DIMINUTAIS NOT OBSERVED IN ANTIBIOTIC TREATED MICE.

2018· article· en· W2789823241 on OpenAlexaffabout
Adam Shute, A Wang, Marc Strous, André G. Buret, Derek M. McKay

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldMedicine
TopicClostridium difficile and Clostridium perfringens research
Canadian institutionsUniversity of Calgary
Fundersnot available
KeywordsHymenolepis diminutaAntibioticsMicrobiologyBiologyPharmacologyCestode infectionsImmunologyHelminths

Abstract

fetched live from OpenAlex

Infection with helminth parasites can ameliorate concomitant inflammatory disease: we showed that mice infected with H. diminuta display significantly less sever di-nitrobenzene sulphonic acid (DNBS)- induced colitis. The commensal bacteria make a significant contribution to gut homeostasis and perturbation of this complex microbiota is often observed in colitis. Thus, the hypothesis arises that H. diminuta evoked protection against colitis is mediated, in least in part, via changes in the colonic microbiota. To determine if infection with the helminth parasite, H. diminuta, evokes distinct changes in the colonic microbiota that are required for the anti-inflammatory effect in the DNBS model of colitis. Bacterial DNA was isolated from colon tissue samples from control and H. diminuta-infected (5 cysticercoids) Balb/c ± DNBS treatment (3 mg, ir, 72h) and amplified using 16s rRNA primers prior to sequencing (Illumina miSeq). Sequence results were demultiplexed and OTU’s were generated on the University of Calgary’s MetaAmp pipeline and mice. Colitis was assessed by colon length, weight loss, a cumulative disease activity score and histopathology. The anti-colitic effect of infection with H. diminuta was assessed in mice given a broad spectrum antibiotic (Abx) regimen. Sequence analysis of the microbiota of H. diminuta-infected and control mice revealed no statistical differences. Abx-treated mice produced a natural Th2 and anti-helminth immune response towards infection with H. diminuta. H. diminuta-infected mice were protected from colitis. DNBS-treated mice ± H. diminuta had a similar colonic microbiota with a major shift from firmicutes to bacteroidetes/proteobacteria. However, H. diminuta-evoked protection against DNBS-induced colitis was significantly reduced in mice with a colonic microbiota that had been significantly reduced by antibiotic treatment (n=4). Infection with H. diminuta may have subtle effects on the colonic microbiota of mice, but the bacteria appear not to be a requirement for either the induction of a helminth-directed TH2 response or successful expulsion of H. diminuta. While there were no striking differences in the microbiota of DNBS versus DNBS+H. diminuta treated mice, the anti-colitic effect of infection with H. diminuta was negated in antibiotic-treated mice. Suggesting that bacteria are involved in this beneficial effect of infection with a cestode parasite in a non-permissive system. NSERC, NSERC CREATE Host-Parasite, and Beverly Phillips Scholarship (University of Calgary)

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.007
Threshold uncertainty score0.025

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0070.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.253
Teacher spread0.238 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes2
Has abstractyes

Explore more

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