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Record W2792587275 · doi:10.1093/ecco-jcc/jjx180.207

P080 Histopathologic evaluation and lymphocyte subpopulations of the duodenal mucosa of Crohn’s disease

2018· article· en· W2792587275 on OpenAlexaboutno aff
Albert Martín‐Cardona, Yamile Zabana Abdo, Marcela Quintanilla, A Carrasco García, Oba O, C Ferrer Cassadó, Fea F

Bibliographic record

VenueJournal of Crohn s and Colitis · 2018
Typearticle
Languageen
FieldMedicine
TopicMicroscopic Colitis
Canadian institutionsnot available
Fundersnot available
KeywordsIntraepithelial lymphocyteDuodenumGastroenterologyMedicineInternal medicineHistopathologyPathologyPopulationBiopsyCrohn's diseaseContext (archaeology)Villous atrophyCoeliac diseaseDiseaseBiology

Abstract

fetched live from OpenAlex

The histopathology of the duodenum of adult Crohn's disease (CD) patients is practically unexplored. Lymphocytic enteritis and duodenal atrophy are considered lesions of the CD histological spectrum but its prevalence is not known (<5% in the general population). In some cases it raises the differential diagnosis with celiac disease. It is unknown whether the so-called celiac cytometric pattern (Fernández-Bañares, PLoS One 2012) is useful in this context. The aims of this study were to assess (1) histopathological abnormalities of the duodenum in CD and their related factors. (2) Intestinal lymphocyte subpopulations related to celiac disease cytometric pattern in the duodenum of CD patients. Retrospective and observational study. Patients were identified from the ENEIDA local database (431 CD), of whom a duodenal biopsy were available (inclusion period: 2002–2017). Clinical characteristics (early CD vs. long-lasting CD, indication for upper gastrointestinal assessment, activity: calprotectin levels and Harvey-Bradshaw scores, Montreal Classification, treatment, celiac disease work-up and stool parasites), endoscopic and histopathological features (intraepithelial lymphocytosis, duodenal mucosal atrophy, inflammatory infiltrate, granulomas, and the presence of H. pylori) were recorded. The celiac cytometric pattern (TCRγ-delta cells >8% and CD3- lymphocytes <10%) was evaluated in a subset of patients. The chi-square test was used to compare groups. We included 72 patients with gastroscopy and duodenal biopsies (47 women, mean age: 47 ± 16.4 years). Of these, 32 (44.4%) showed endoscopic abnormalities (15 aphtha and 17 gastroduodenitis). Duodenal histology showed alterations in 47 (65.3%): lymphocytic enteritis (n = 44, 61.1%), non-celiac duodenal atrophy (n = 2, 2.8%), chronic inflammatory infiltrate (n = 12, 16.7%) and granulomas (n = 3, 4.2%). In 11 patients, lymphocytic enteritis could be attributed to a cause other than CD (4 H. pylori, two celiac disease, two NSAIDs, three parasites). The study of lymphocyte subpopulations (n = 17) showed: complete celiac pattern (2.8%); CD3− < 10% (4.2%); non-celiac pattern (93%). CD3− was >20% in 41.2% of CD patients. No relationship was found between histopathological abnormalities, activity, treatment and early vs. long-lasting Crohn's disease. Lymphocytic enteritis (and not duodenal atrophy) is a very common histopathological lesion of the duodenum of CD patients even in macroscopically normal mucosa. In half of the cases there is >20% of CD3− subpopulations, which can be cytotoxic cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.307
Teacher spread0.283 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2018
Admission routes1
Has abstractyes

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