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Record W2792587275 · doi:10.1093/ecco-jcc/jjx180.207

P080 Histopathologic evaluation and lymphocyte subpopulations of the duodenal mucosa of Crohn’s disease

2018· article· en· W2792587275 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

aboutThe title or abstract carries a Canadian signal from the geographic lexicon.
no affNo Canadian affiliation: this work is invisible to an affiliation-only frame.
No Canadian affiliation. An affiliation-only frame, the usual design, would never have seen this work. It is one of the works that make the case for inverting the frame.

Bibliographic record

VenueJournal of Crohn s and Colitis · 2018
Typearticle
Languageen
FieldMedicine
TopicMicroscopic Colitis
Canadian institutionsnot available
Fundersnot available
KeywordsIntraepithelial lymphocyteDuodenumGastroenterologyMedicineInternal medicineHistopathologyPathologyPopulationBiopsyCrohn's diseaseContext (archaeology)Villous atrophyCoeliac diseaseDiseaseBiology

Abstract

fetched live from OpenAlex

The histopathology of the duodenum of adult Crohn's disease (CD) patients is practically unexplored. Lymphocytic enteritis and duodenal atrophy are considered lesions of the CD histological spectrum but its prevalence is not known (<5% in the general population). In some cases it raises the differential diagnosis with celiac disease. It is unknown whether the so-called celiac cytometric pattern (Fernández-Bañares, PLoS One 2012) is useful in this context. The aims of this study were to assess (1) histopathological abnormalities of the duodenum in CD and their related factors. (2) Intestinal lymphocyte subpopulations related to celiac disease cytometric pattern in the duodenum of CD patients. Retrospective and observational study. Patients were identified from the ENEIDA local database (431 CD), of whom a duodenal biopsy were available (inclusion period: 2002–2017). Clinical characteristics (early CD vs. long-lasting CD, indication for upper gastrointestinal assessment, activity: calprotectin levels and Harvey-Bradshaw scores, Montreal Classification, treatment, celiac disease work-up and stool parasites), endoscopic and histopathological features (intraepithelial lymphocytosis, duodenal mucosal atrophy, inflammatory infiltrate, granulomas, and the presence of H. pylori) were recorded. The celiac cytometric pattern (TCRγ-delta cells >8% and CD3- lymphocytes <10%) was evaluated in a subset of patients. The chi-square test was used to compare groups. We included 72 patients with gastroscopy and duodenal biopsies (47 women, mean age: 47 ± 16.4 years). Of these, 32 (44.4%) showed endoscopic abnormalities (15 aphtha and 17 gastroduodenitis). Duodenal histology showed alterations in 47 (65.3%): lymphocytic enteritis (n = 44, 61.1%), non-celiac duodenal atrophy (n = 2, 2.8%), chronic inflammatory infiltrate (n = 12, 16.7%) and granulomas (n = 3, 4.2%). In 11 patients, lymphocytic enteritis could be attributed to a cause other than CD (4 H. pylori, two celiac disease, two NSAIDs, three parasites). The study of lymphocyte subpopulations (n = 17) showed: complete celiac pattern (2.8%); CD3− < 10% (4.2%); non-celiac pattern (93%). CD3− was >20% in 41.2% of CD patients. No relationship was found between histopathological abnormalities, activity, treatment and early vs. long-lasting Crohn's disease. Lymphocytic enteritis (and not duodenal atrophy) is a very common histopathological lesion of the duodenum of CD patients even in macroscopically normal mucosa. In half of the cases there is >20% of CD3− subpopulations, which can be cytotoxic cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.242
Threshold uncertainty score0.236

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.307
Teacher spread0.283 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it