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Record W2793399690 · doi:10.1093/jcag/gwy009.337

A337 KABUKI SYNDROME: A NEW ADDITION TO THE DIFFERENTIAL DIAGNOSIS OF LOW-GGT NEONATAL CHOLESTASIS

2018· article· en· W2793399690 on OpenAlexaff
F. Briglia, Orlee R. Guttman, Oana Popescu, C. Senger, Richard A. Schreiber

Bibliographic record

VenueJournal of the Canadian Association of Gastroenterology · 2018
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Rare Diseases
Canadian institutionsBC Children's Hospital
Fundersnot available
KeywordsMedicineCholestasisHypotoniaGastroenterologyJaundiceInternal medicineNeonatal cholestasisPediatricsLiver biopsyBiliary atresiaEndocrinologyBiopsyLiver transplantation

Abstract

fetched live from OpenAlex

Neonatal low-GGT cholestasis has a unique differential diagnosis centered on congenital disorders of bile acid transport or synthesis. Kabuki syndrome is a genetic condition with distinctive facies, developmental delay, and skeletal, renal and cardiac defects. While Kabuki has been associated with high-GGT cholestatic conditions including biliary atresia, patients with low-GGT cholestasis have not previously been described. To describe 2 patients with Kabuki syndrome and low-GGT neonatal cholestasis Chart review. Case 1: A female infant of non-consanguinous South Asian parents was born at 35 6/7 weeks. Antenatal US was normal. Facial dysmorphisms and hypotonia were noted at birth. Whole exome sequencing analysis confirmed Kabuki syndrome with de novo deletion in the KMT2D gene. Ventilation was needed from birth, with right-sided heart failure from pulmonary hypertension. She required TPN. Cholestasis was identified at 6 weeks: conjugated bilirubin 175umol/L, AST 404U/L, ALT 121U/L, ALP 289U/L, GGT 64U/L (70–130). Abdominal US: hepatosplenomegaly and ascites without biliary abnormalities. CMV infection occurred at 12 weeks. Liver biochemistry improved with ursodeoxycholic acid, cessation of TPN and CMV resolution. She was discharged home at 7 months. Case 2: A male infant of non-consanguinous Filipino parents was born at 25 4/7 weeks. He had a patent ductus arteriosis and solitary renal cyst but no dysmorphisms or other congenital abnormalities. He required TPN. Intractable pulmonary hypertension necessitated prolonged ventilation. Cholestasis was identified at 4 weeks. Stools were initially pale. HIDA scan was non-excretory. Liver biopsy: giant cell transformation, mild portal fibrosis, no bile duct proliferation. Stools later became pigmented. A jaundice gene chip (EGL) found no mutations of familial intrahepatic cholestasis (PFIC). Kabuki syndrome was diagnosed at 4 months on chromosome array. Peak liver biochemistry: conjugated bilirubin 512umol/L, AST 731U/L, ALT 345 U/L, ALP 891U/L, GGT 65U/L. Repeat liver biopsy at 3 months: extensive giant cell transformation. EM: canaliculi with markedly reduced stubby microvilli, with finely granular to filamentous material suggesting BSEP deficiency (PFIC type 2). He died at 5 months from pulmonary hypertension. These are the first reported cases of Kabuki syndrome with low-GGT neonatal cholestasis. KMT2D gene mutations should be considered on the short list of genetic disorders causing low-GGT cholestasis. We hypothesize that in Kabuki syndrome, KMT2D gene mutations modify lysine methytransferase activity and impair FXR expression of target gene products including BSEP, leading to phenotypic PFIC type 2 disorders. Kabuki syndrome gene mutations should be included in next generation jaundice gene chip panels for neonatal cholestasis. None

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Case report · Consensus signal: Case report
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.002
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0020.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.004
GPT teacher head0.201
Teacher spread0.197 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designCase report
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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