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Record W2795192710 · doi:10.20381/ruor-13114

Frequency and significance of HIV-1 infection of CD8+ T-cells: Implications for viral pathogenesis

2008· dissertation· en· W2795192710 on OpenAlexaboutno aff
Naveed Gulzar

Bibliographic record

VenueuO Research (University of Ottawa) · 2008
Typedissertation
Languageen
FieldImmunology and Microbiology
TopicHIV Research and Treatment
Canadian institutionsnot available
Fundersnot available
KeywordsPathogenesisImmunologyHuman immunodeficiency virus (HIV)VirologyViral infectionCD8Cytotoxic T cellViral pathogenesisMedicineViral loadBiologyVirusViral replicationImmune systemGenetics

Abstract

fetched live from OpenAlex

To date, the effect of HIV-1 infection on CD8+ T-cells remains poorly studied. Previous studies have shown that the effector functions of CD8+ T-cells diminish during AIDS. We postulated that CD8+ T-cell functions decrease due to the tropism of HIV-1 for CD8+ T-cells. Therefore we examined whether CD8+ T-cells provide suitable targets for HIV-1 infection and the mechanism(s) by which the virus enters the cells. We hypothesized that HIV-1 entry into these cells may be facilitated through access to extracellular receptors. Ex vivo experiments were performed using blood samples from a cohort of HIV-1 infected patients attending the Ottawa Hospital Immunodeficiency Clinic. Frequency of HIV-1 infection was monitored by flow cytometric detection of HIV-1 p24 antigen and viral production from separated CD8+ and CD4+ T-cell lineages was assayed by the quantitation of viral RNA transcripts. Primary CD8+ T-cells and CD8+ T-cell clones used in the in vitro studies were isolated from the peripheral blood of healthy volunteers. HIV-1 infection was monitored by both ELISA and flow cytometric analyses. Similarly, receptor analysis was performed by flow cytometry and confirmed by RT-PCR analysis. There was a significantly higher frequency of CD8+HIV+ cells than CD4+HIV+ cells found in the ex vivo studies of patient samples, however, viral production from the CD8+HIV+ subset was 2-3 logs lower than that found in CD4+HIV+ T-cells. In addition, CD8+ T-cells served as suitable targets for productive HIV-1 infection in vitro and preferential HIV-1 replication occurred in the memory T-cell subset. Interestingly, the HTLV-I transformed CD8+ T-cell clones exhibited HIV-1 production 20-fold greater than CD4+ T-cells. Our research also demonstrated that during the course of infection, there was a decrease in mean expression of the CD8 and CXCR4 cell-surface molecules in the HIV-1 infected CD8+ T-cell clones. Accordingly, the use of antibodies to the CD8 or CXCR4 molecules eradicated viral adsorption and replication in the CD8+ T-cell clones. Our research was the first to demonstrate the significance and susceptibility of CD8+ T-cells to HIV-1 infection through both ex vivo and in vitro analyses. We conclude, with multiple lines of evidence detecting and measuring HIV-1 infection of CD8+ T-lymphocytes, that this cellular target and reservoir may be central to HIV-1 pathogenesis. By identifying a novel target of HIV-1 and potential cellular receptors used by the virus, future therapeutic strategies may be designed to help prevent and treat HIV-1 infection.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.036
GPT teacher head0.302
Teacher spread0.266 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2008
Admission routes1
Has abstractyes

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